RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 IGLV2-23P01705 113 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 CD3EP07766 207 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 PRRX1P54821 245 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 DEFA6Q01524 100 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 LURAP1LQ8IV03 231 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 ZCCHC24Q8N2G6 241 aaKnown RBP8.44□□□□□ -1.06
CD44-210ENST00000434472 TEX45Q8NA69 505 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 THAP8Q8NA92 274 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 OR10W1Q8NGF6 305 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 FAM122AQ96E09 287 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 TMEM133Q9H2Q1 129 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 OSTCQ9NRP0 149 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 CTSZQ9UBR2 303 aa8.44□□□□□ -1.06
CD44-210ENST00000434472 CADP27708 2225 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 TCRBV4S1A1TA0A5B7 111 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 K7EN84 100 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 COX7A2P2O60397 106 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 FSTL3O95633 263 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 IGHV1-8P0DP01 117 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 CRYBB3P26998 211 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 REG1BP48304 166 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 TAS2R60P59551 318 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 CENPWQ5EE01 88 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 MOB3BQ86TA1 216 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 SPACA3Q8IXA5 215 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 GBGT1Q8N5D6 347 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 EP300Q09472 2414 aaPredicted RBP8.43□□□□□ -1.06
CD44-210ENST00000434472 SVILO95425 2214 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 PSMB11A5LHX3 300 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 K7ENP7 123 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 HNF1AP20823 631 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 PPOXP50336 477 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 CASP6P55212 293 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 LGALS4P56470 323 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 ERVFC1-1P60608 527 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 MLANAQ16655 118 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 FAM209BQ5JX69 171 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 C10orf113Q5VZT2 155 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 CDPF1Q6NVV7 123 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 WDR73Q6P4I2 378 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 DMRTC2Q8IXT2 367 aaPredicted RBP8.43□□□□□ -1.06
CD44-210ENST00000434472 MMD2Q8IY49 270 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 OR2T6Q8NHC8 308 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 C22orf15Q8WYQ4 148 aa8.43□□□□□ -1.06
CD44-210ENST00000434472 NOL4LQ96MY1 436 aaPredicted RBP8.43□□□□□ -1.06
CD44-210ENST00000434472 CGB1A6NKQ9 187 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 ISLRO14498 428 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 RBP4P02753 201 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 MT-ND6P03923 174 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 GZMBP10144 247 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 GATA2P23769 480 aaPredicted RBP8.42□□□□□ -1.06
CD44-210ENST00000434472 ADMP35318 185 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 SUMO1P63165 101 aaKnown RBP8.42□□□□□ -1.06
CD44-210ENST00000434472 UBE2L3P68036 154 aaKnown RBP8.42□□□□□ -1.06
CD44-210ENST00000434472 WT1-ASQ06250 92 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 C9orf152Q5JTZ5 239 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 PVRIGQ6DKI7 326 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 STXBP6Q8NFX7 210 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 SLC25A2Q9BXI2 301 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 RALYQ9UKM9 306 aaKnown RBP8.42□□□□□ -1.06
CD44-210ENST00000434472 V9GYV3 84 aa8.42□□□□□ -1.06
CD44-210ENST00000434472 GGTLC3B5MD39 225 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 CORTO00230 105 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 ENSAO43768 121 aaKnown RBP8.41□□□□□ -1.06
CD44-210ENST00000434472 SLC25A17O43808 307 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 RPL27AP46776 148 aaKnown RBP8.41□□□□□ -1.06
CD44-210ENST00000434472 COMPP49747 757 aaPredicted RBP8.41□□□□□ -1.06
CD44-210ENST00000434472 PAFAH1B2P68402 229 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 PAX2Q02962 417 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 FOXC1Q12948 553 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 IQCJQ1A5X6 159 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 OR5AU1Q8NGC0 362 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 OR1L6Q8NGR2 347 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 NPIPB3Q92617 1050 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 FAM167A-AS1Q96KT0 104 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 PAXXQ9BUH6 204 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 GNB1LQ9BYB4 327 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 MRPL18Q9H0U6 180 aaKnown RBP8.41□□□□□ -1.06
CD44-210ENST00000434472 AMMECR1Q9Y4X0 333 aaPredicted RBP8.41□□□□□ -1.06
CD44-210ENST00000434472 WDFY4Q6ZS81 3184 aa8.41□□□□□ -1.06
CD44-210ENST00000434472 SLC17A3O00476 420 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 CRYGCP07315 174 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 DDTP30046 118 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 DIAPH2-AS1Q14236 149 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 REC114Q7Z4M0 266 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 BEND2Q8NDZ0 799 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 PERPQ96FX8 193 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 IGF2BP2-AS1Q96M15 143 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 TRGV9Q99603 122 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 RNF5Q99942 180 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 CHRDL1Q9BU40 450 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 COL25A1Q9BXS0 654 aaPredicted RBP8.4□□□□□ -1.06
CD44-210ENST00000434472 FNDC4Q9H6D8 234 aaPredicted RBP8.4□□□□□ -1.06
CD44-210ENST00000434472 ZNF355PQ9NSJ1 428 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 TTC28Q96AY4 2481 aa8.4□□□□□ -1.06
CD44-210ENST00000434472 IGHV2-26A0A0B4J1V2 119 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 A0A1W2PPI3 338 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 E7EUB6 86 aa8.4□□□□□ -1.07
CD44-210ENST00000434472 CRYGBP07316 175 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms