RNA–Protein interactions for RNA: ENST00000430711.5

COL28A1-202, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 5

Gene COL28A1, Length 2,323 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-202ENST00000430711 PQLC2Q6ZP29 291 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 KIR2DL5AQ8N109 375 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 ZNF439Q8NDP4 499 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 SLC24A4Q8NFF2 622 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 OR1L6Q8NGR2 347 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 OR2T6Q8NHC8 308 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 TMEM18Q96B42 140 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 FER1L6-AS2Q96M78 137 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 GNB4Q9HAV0 340 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 TPSG1Q9NRR2 321 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 TMEM14BQ9NUH8 114 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 TP53TG5Q9Y2B4 290 aa5.84□□□□□ -1.47
COL28A1-202ENST00000430711 USP9XQ93008 2570 aaPredicted RBP5.84□□□□□ -1.48
COL28A1-202ENST00000430711 TRAV34A0A0B4J273 112 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 CGB1A6NKQ9 187 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF705FA8MVS1 300 aaPredicted RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 TCAPO15273 167 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 GCGP01275 180 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF883P0CG24 379 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF705DP0CH99 300 aaPredicted RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF705BP0CI00 300 aaPredicted RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 CT45A6P0DMU7 189 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 CT45A5P0DMU8 189 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 CT45A7P0DMV0 189 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 PYYP10082 97 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF90Q03938 601 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 MBNL2Q5VZF2 373 aaKnown RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF841Q6ZN19 808 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 MMD2Q8IY49 270 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 FAM19A2Q8N3H0 131 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 TMEM178AQ8NBL3 297 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 CMTM2Q8TAZ6 248 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 VN1R17PQ8TDU5 208 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 S1PR3Q99500 378 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ASCL2Q99929 193 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 JPT1Q9UK76 154 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 FAM215AQ9Y5M1 114 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ITPR1Q14643 2758 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 A0A1B0GWJ7 208 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 SNURFLB1AK76 121 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 VWC2LB2RUY7 222 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 H3BTX0 84 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 J3QW42 95 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 CORTO00230 105 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 CXorf1O96002 111 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 LHBP01229 141 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 REG1AP05451 166 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 OR10J1P30954 320 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 TDGF1P3P51864 188 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 TMPRSS3P57727 454 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 YPEL3P61236 119 aaPredicted RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 LCN2P80188 198 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 FAM27E3Q08E93 113 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 C1orf194Q5T5A4 169 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 MRPL54Q6P161 138 aaKnown RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 KCNIP4Q6PIL6 250 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 BHLHA15Q7RTS1 189 aaPredicted RBP5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ATOH7Q8N100 152 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 LOXL4Q96JB6 756 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 GAFA1Q96PS6 74 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 NABP2Q9BQ15 211 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 ZGRF1Q86YA3 2104 aa5.83□□□□□ -1.48
COL28A1-202ENST00000430711 FCN1O00602 326 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 MGST3O14880 152 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ADH4P08319 380 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 NPSP0C0P6 89 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 SAA1P0DJI8 122 aaPredicted RBP5.82□□□□□ -1.48
COL28A1-202ENST00000430711 CCKARP32238 428 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 GNG5P63218 68 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 MRPS11P82912 194 aaKnown RBP5.82□□□□□ -1.48
COL28A1-202ENST00000430711 DEFB109BQ30KR1 87 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 TEPPQ6URK8 271 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 TCF24Q7RTU0 167 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 SPATA12Q7Z6I5 190 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 DEFB124Q8NES8 71 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 NEUROG1Q92886 237 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 FNDC4Q9H6D8 234 aaPredicted RBP5.82□□□□□ -1.48
COL28A1-202ENST00000430711 GCM1Q9NP62 436 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ASCL3Q9NQ33 180 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 TMEM106BQ9NUM4 274 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 IL36BQ9NZH7 164 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 SLC45A2Q9UMX9 530 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 OR51B2Q9Y5P1 312 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 MYO18BQ8IUG5 2567 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ARHGAP32A7KAX9 2087 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 IGHV3-21A0A0B4J1V1 117 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 TEX50A0A1B0GTY4 177 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF891A8MT65 544 aaPredicted RBP5.82□□□□□ -1.48
COL28A1-202ENST00000430711 WIPF1O43516 503 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 PRB1P04280 392 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 RAB4AP20338 218 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 CHRNB4P30926 498 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 HOXC12P31275 282 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ERVFC1-1P60608 527 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 SELENOTP62341 195 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 CCL8P80075 99 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 SLAQ13239 276 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 ZNF124Q15973 351 aa5.82□□□□□ -1.48
COL28A1-202ENST00000430711 CR1LQ2VPA4 569 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms