RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 NBEAP1P0C6P0 100 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 PCSK4Q6UW60 755 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 TCF24Q7RTU0 167 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 IGKV3OR2-268A0A0C4DH90 116 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 A1L4Q6 167 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 Q6ZRM9 215 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 WBP1Q96G27 269 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 IDI2-AS1Q9NZ38 188 aa10.84□□□□□ -0.67
SCN1B-202ENST00000415950 MPZP25189 248 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 PTGDSP41222 190 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 HBBP68871 147 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 PRB3Q04118 309 aaPredicted RBP10.83□□□□□ -0.68
SCN1B-202ENST00000415950 RELQ04864 619 aaPredicted RBP10.83□□□□□ -0.68
SCN1B-202ENST00000415950 CCDC144NLQ6NUI1 221 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 LHFPL4Q7Z7J7 247 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 VENTXO95231 258 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 TMEM50AO95807 157 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 OR10J6PQ8NGY7 276 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 ZNF414Q96IQ9 312 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 REPIN1Q9BWE0 567 aaKnown RBP10.83□□□□□ -0.68
SCN1B-202ENST00000415950 SSBP4Q9BWG4 385 aaPredicted RBP10.83□□□□□ -0.68
SCN1B-202ENST00000415950 PTPN13Q12923 2485 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 IGHV3-66A0A0C4DH42 116 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 DYSFO75923 2080 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 ADMP35318 185 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 ACSF3Q4G176 576 aaPredicted RBP10.83□□□□□ -0.68
SCN1B-202ENST00000415950 DOPEY1Q5JWR5 2465 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 ZNF418Q8TF45 676 aaPredicted RBP10.83□□□□□ -0.68
SCN1B-202ENST00000415950 OR5P3Q8WZ94 311 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 PRDM13Q9H4Q3 707 aa10.83□□□□□ -0.68
SCN1B-202ENST00000415950 NLRC5Q86WI3 1866 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 TNCP24821 2201 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 LTBRP36941 435 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 ZIC4Q8N9L1 334 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 OR13A1Q8NGR1 328 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 OCC1Q8TAD7 63 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 OR11H12B2RN74 326 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 IGHV3-23P01764 117 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 APOHP02749 345 aaPredicted RBP10.82□□□□□ -0.68
SCN1B-202ENST00000415950 LIPFP07098 398 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 MIR17HGQ75NE6 70 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 NIT1Q86X76 327 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 OR11H1Q8NG94 326 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 OR4C13Q8NGP0 309 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 DYNLRB2Q8TF09 96 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 IL36BQ9NZH7 164 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 YLPM1P49750 1951 aaKnown RBP10.82□□□□□ -0.68
SCN1B-202ENST00000415950 MALRD1Q5VYJ5 2156 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 TRAV24A0A0B4J272 114 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 NRN1Q9NPD7 142 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 JPT1Q9UK76 154 aa10.82□□□□□ -0.68
SCN1B-202ENST00000415950 PRR33A8MZF0 331 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 M0R381 172 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 MFAP4P55083 255 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 TTC32Q5I0X7 151 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 PEF1Q9UBV8 284 aaKnown RBP10.81□□□□□ -0.68
SCN1B-202ENST00000415950 CSPG4Q6UVK1 2322 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 A0A1B0GWB2 263 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 B4E171 279 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 TSPAN7P41732 249 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 DLX6P56179 175 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 STARD6P59095 220 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 SPSB3Q6PJ21 355 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 PNRC2Q9NPJ4 139 aaKnown RBP10.81□□□□□ -0.68
SCN1B-202ENST00000415950 PLSCR2Q9NRY7 297 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 LAMTOR2Q9Y2Q5 125 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 SOX21Q9Y651 276 aaPredicted RBP10.81□□□□□ -0.68
SCN1B-202ENST00000415950 LILRA1O75019 489 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 CCL1P22362 96 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 SAXO1Q8IYX7 474 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 SAP25Q8TEE9 199 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 METTL26Q96S19 204 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 IGHV3OR16-10A0A075B7F0 116 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 EREGO14944 169 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 TMEM170BQ5T4T1 132 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 FAM53AQ6NSI3 398 aaPredicted RBP10.81□□□□□ -0.68
SCN1B-202ENST00000415950 C1orf147Q96MC9 270 aaPredicted RBP10.81□□□□□ -0.68
SCN1B-202ENST00000415950 LINC00470Q9BZP3 86 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 TMEM106BQ9NUM4 274 aa10.81□□□□□ -0.68
SCN1B-202ENST00000415950 C9JCJ5 164 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 APOMO95445 188 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 LINC00271P0C7V0 271 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 SRSF4Q08170 494 aaKnown RBP10.8□□□□□ -0.68
SCN1B-202ENST00000415950 FAM216BQ8N7L0 139 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 MEGF9Q9H1U4 602 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 PPIAL4CA0A0B4J2A2 164 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 PSMB11A5LHX3 300 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 GPX1P07203 203 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 PPIAL4GP0DN37 164 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 GZMBP10144 247 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 PNKDQ8N490 385 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 TMEM170AQ8WVE7 144 aa10.8□□□□□ -0.68
SCN1B-202ENST00000415950 LGALS3P17931 250 aaKnown RBP10.79□□□□□ -0.68
SCN1B-202ENST00000415950 PSG7Q13046 419 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 LY6EQ16553 131 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 TBR1Q16650 682 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 C19orf54Q5BKX5 351 aa10.79□□□□□ -0.68
SCN1B-202ENST00000415950 ZNF324BQ6AW86 544 aaPredicted RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms