RNA–Protein interactions for RNA: ENST00000414115.5

SHC1-207, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-207ENST00000414115 SLC24A4Q8NFF2 622 aa12.8□□□□□ -0.36
SHC1-207ENST00000414115 OR4D5Q8NGN0 318 aa12.8□□□□□ -0.36
SHC1-207ENST00000414115 DPF1Q92782 380 aa12.8□□□□□ -0.36
SHC1-207ENST00000414115 EEF1AKMT3Q96AZ1 226 aa12.8□□□□□ -0.36
SHC1-207ENST00000414115 MISP3Q96FF7 219 aa12.8□□□□□ -0.36
SHC1-207ENST00000414115 CXorf58Q96LI9 332 aa12.8□□□□□ -0.36
SHC1-207ENST00000414115 MAGT1Q9H0U3 335 aa12.8□□□□□ -0.36
SHC1-207ENST00000414115 PEF1Q9UBV8 284 aaKnown RBP12.8□□□□□ -0.36
SHC1-207ENST00000414115 IGHV3-21A0A0B4J1V1 117 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 C7orf66A4D0T2 115 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 LINC01619G3V211 115 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 K7EIM0 57 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 TRBV12-3P01733 135 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 HSPB1P04792 205 aaKnown RBP12.79□□□□□ -0.36
SHC1-207ENST00000414115 NKX2-1P43699 371 aaPredicted RBP12.79□□□□□ -0.36
SHC1-207ENST00000414115 PVRIGQ6DKI7 326 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 LINC00482Q8N8I6 264 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 VN1R17PQ8TDU5 208 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 CCDC140Q96MF4 163 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 RANGRFQ9HD47 186 aaPredicted RBP12.79□□□□□ -0.36
SHC1-207ENST00000414115 GSKIPQ9P0R6 139 aa12.79□□□□□ -0.36
SHC1-207ENST00000414115 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.78□□□□□ -0.36
SHC1-207ENST00000414115 C5orf51A6NDU8 294 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 SYNGR2O43760 224 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 MED6O75586 246 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 OR8U8P0C7N1 319 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 IAPPP10997 89 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 ID3Q02535 119 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 ZNF502Q8TBZ5 544 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 SCARB1Q8WTV0 552 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 TMEM170AQ8WVE7 144 aa12.78□□□□□ -0.36
SHC1-207ENST00000414115 TRBV7-1A0A0A6YYK4 115 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 I3L2K1 104 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 SSNA1O43805 119 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 SCGB1D2O95969 90 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 MT-CO2P00403 227 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 IFNA10P01566 189 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 NPY1RP25929 384 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 POLR2GP62487 172 aaKnown RBP eCLIP12.77□□□□□ -0.37
SHC1-207ENST00000414115 OXA1LQ15070 435 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 C2orf83Q53S99 150 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 FAM209BQ5JX69 171 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 CLEC19AQ6UXS0 136 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 GSG1LQ6UXU4 331 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 PINX1Q96BK5 328 aaKnown RBP12.77□□□□□ -0.37
SHC1-207ENST00000414115 C21orf62Q9NYP8 219 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 ALG5Q9Y673 324 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 U3KQ87 197 aa12.77□□□□□ -0.37
SHC1-207ENST00000414115 PPP5D1E7EU14 171 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 CORTO00230 105 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 BMPR1BO00238 502 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 WRBO00258 174 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 GOSR2O14653 212 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 SSSCA1O60232 199 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 HOXD3P31249 432 aaPredicted RBP12.76□□□□□ -0.37
SHC1-207ENST00000414115 SLURP1P55000 103 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 WFDC9Q8NEX5 89 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 C2orf50Q96LR7 162 aa12.76□□□□□ -0.37
SHC1-207ENST00000414115 CIB3Q96Q77 187 aaPredicted RBP12.76□□□□□ -0.37
SHC1-207ENST00000414115 IGHV3-48P01763 117 aa12.75□□□□□ -0.37
SHC1-207ENST00000414115 CD33P20138 364 aa12.75□□□□□ -0.37
SHC1-207ENST00000414115 ZP3P21754 424 aa12.75□□□□□ -0.37
SHC1-207ENST00000414115 GPR183P32249 361 aa12.75□□□□□ -0.37
SHC1-207ENST00000414115 NOXA1Q86UR1 476 aa12.75□□□□□ -0.37
SHC1-207ENST00000414115 SIX6O95475 246 aa12.74□□□□□ -0.37
SHC1-207ENST00000414115 LY86O95711 162 aa12.74□□□□□ -0.37
SHC1-207ENST00000414115 MBPP02686 304 aaPredicted RBP12.74□□□□□ -0.37
SHC1-207ENST00000414115 CLEC3BP05452 202 aa12.74□□□□□ -0.37
SHC1-207ENST00000414115 ARL3P36405 182 aa12.74□□□□□ -0.37
SHC1-207ENST00000414115 OPRK1P41145 380 aa12.74□□□□□ -0.37
SHC1-207ENST00000414115 ATP5IP56385 69 aaPredicted RBP12.74□□□□□ -0.37
SHC1-207ENST00000414115 UBAC2Q8NBM4 344 aa12.74□□□□□ -0.37
SHC1-207ENST00000414115 RNASEH2CQ8TDP1 164 aaKnown RBP12.74□□□□□ -0.37
SHC1-207ENST00000414115 FNDC4Q9H6D8 234 aaPredicted RBP12.74□□□□□ -0.37
SHC1-207ENST00000414115 RCL1Q9Y2P8 373 aaKnown RBP12.74□□□□□ -0.37
SHC1-207ENST00000414115 C15orf62A8K5M9 175 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 F8W735 103 aaPredicted RBP12.73□□□□□ -0.37
SHC1-207ENST00000414115 H3BP45 60 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 GGCTO75223 188 aaKnown RBP12.73□□□□□ -0.37
SHC1-207ENST00000414115 TMEM50AO95807 157 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 MFAP4P55083 255 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 IL15RAQ13261 267 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 RPEL1Q2QD12 228 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 Q56UQ5 140 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 DCUN1D4Q92564 292 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 DLX4Q92988 240 aaPredicted RBP12.73□□□□□ -0.37
SHC1-207ENST00000414115 OR4C12Q96R67 309 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 ATP6V0BQ99437 205 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 ZC4H2Q9NQZ6 224 aa12.73□□□□□ -0.37
SHC1-207ENST00000414115 RPS10-NUDT3A0A1W2PQS6 291 aa12.72□□□□□ -0.37
SHC1-207ENST00000414115 OR2T8A6NH00 312 aa12.72□□□□□ -0.37
SHC1-207ENST00000414115 TGOLN2O43493 480 aa12.72□□□□□ -0.37
SHC1-207ENST00000414115 IFNA4P05014 189 aa12.72□□□□□ -0.37
SHC1-207ENST00000414115 FCGR2BP31994 310 aaPredicted RBP12.72□□□□□ -0.37
SHC1-207ENST00000414115 RPP30P78346 268 aaKnown RBP12.72□□□□□ -0.37
SHC1-207ENST00000414115 SPANXN5Q5MJ07 72 aa12.72□□□□□ -0.37
SHC1-207ENST00000414115 ACSM6Q6P461 480 aa12.72□□□□□ -0.37
SHC1-207ENST00000414115 BSCL2Q96G97 398 aaPredicted RBP12.72□□□□□ -0.37
SHC1-207ENST00000414115 RAB40CQ96S21 281 aa12.72□□□□□ -0.37
SHC1-207ENST00000414115 MGAT4CQ9UBM8 478 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms