RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 C7orf71A4D174 169 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 MBD3L4A6NDZ8 208 aaPredicted RBP20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 MBD3L3A6NE82 208 aaPredicted RBP20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 MBD3L5A6NJ08 208 aaPredicted RBP20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 C11orf44Q8N8P7 122 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 MBD3L2Q8NHZ7 208 aaPredicted RBP20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 HIST1H4GQ99525 98 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 ZNF319Q9P2F9 582 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 GATA2P23769 480 aaPredicted RBP20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 SRSF6Q13247 344 aaKnown RBP20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 LEMD1Q68G75 181 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 DOCK6Q96HP0 2047 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 ERASQ7Z444 233 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 RNF125Q96EQ8 232 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 REC114Q7Z4M0 266 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 IGHV2-26A0A0B4J1V2 119 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 OR10S1Q8NGN2 331 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 OTORQ9NRC9 128 aa20.84■□□□□ 0.93
SPIRE1-202ENST00000409402 TMEM178BH3BS89 294 aa20.83■□□□□ 0.93
SPIRE1-202ENST00000409402 SPATA45Q537H7 98 aa20.83■□□□□ 0.93
SPIRE1-202ENST00000409402 NABP1Q96AH0 204 aa20.83■□□□□ 0.93
SPIRE1-202ENST00000409402 ZNF256Q9Y2P7 627 aaPredicted RBP20.83■□□□□ 0.93
SPIRE1-202ENST00000409402 TRAV41A0A0B4J266 112 aa20.83■□□□□ 0.92
SPIRE1-202ENST00000409402 ZNF362Q5T0B9 420 aaPredicted RBP20.83■□□□□ 0.92
SPIRE1-202ENST00000409402 MST1P26927 711 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 C18orf12Q96KH6 178 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 KCNS1Q96KK3 526 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 ZP1P60852 638 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 TAS2R60P59551 318 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 C2orf88Q9BSF0 95 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 GREB1Q4ZG55 1949 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 RNASE1P07998 156 aaKnown RBP20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 ZNF525Q8N782 197 aa20.82■□□□□ 0.92
SPIRE1-202ENST00000409402 RPLP1P05386 114 aaKnown RBP20.81■□□□□ 0.92
SPIRE1-202ENST00000409402 PRELID3AQ96N28 172 aa20.81■□□□□ 0.92
SPIRE1-202ENST00000409402 DUTP33316 252 aaKnown RBP20.81■□□□□ 0.92
SPIRE1-202ENST00000409402 FAM89BQ8N5H3 189 aa20.81■□□□□ 0.92
SPIRE1-202ENST00000409402 UQCRFS1P47985 274 aa20.81■□□□□ 0.92
SPIRE1-202ENST00000409402 NYNRINQ9P2P1 1898 aaKnown RBP20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 DOCK4Q8N1I0 1966 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 LOC107984156A0A0G2JMH3 177 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 RAMP3O60896 148 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 CLPSP04118 112 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 PRCDQ00LT1 54 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 ARL17AQ8IVW1 177 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 IGHG3P01860 377 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 MINOS1Q5TGZ0 78 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 PAQR4Q8N4S7 273 aaPredicted RBP20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 FAM131CQ96AQ9 280 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 RPP21Q9H633 154 aaKnown RBP20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 RPUSD1Q9UJJ7 312 aaKnown RBP20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 MINOS1-NBL1R4GNA1 71 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 SCO2A0A1W2PP80 73 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 ZNF324BQ6AW86 544 aaPredicted RBP20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 PAX8Q06710 450 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 Q6AWC8 147 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 FAM90A9PA6NNJ1 464 aa20.8■□□□□ 0.92
SPIRE1-202ENST00000409402 A0A1B0GUT8 65 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 IGHV1-8P0DP01 117 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 JOSD1Q15040 202 aaPredicted RBP20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 TMEM200BQ69YZ2 307 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 LRTM2Q8N967 370 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 FER1L6-AS1Q8NA97 138 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 NHLRC3Q5JS37 347 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 SSC4DQ8WTU2 575 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 SBF1O95248 1867 aa20.79■□□□□ 0.92
SPIRE1-202ENST00000409402 OOSP1A8MZH6 123 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 PRR32B1ATL7 298 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 GLMPQ8WWB7 406 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 A0A1B0GW15 77 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 K7ENP7 123 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 ZNF257Q9Y2Q1 563 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 SLC25A16P16260 332 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 GRIFINA4D1Z8 144 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 HEPN1Q6WQI6 88 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 ASCL2Q99929 193 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 CD7P09564 240 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 FAM71F2Q6NXP2 309 aa20.78■□□□□ 0.92
SPIRE1-202ENST00000409402 OTX1P32242 354 aaPredicted RBP20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 ZNF585BQ52M93 769 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 SOX21Q9Y651 276 aaPredicted RBP20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 DICER1Q9UPY3 1922 aaKnown RBP20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 TMEM170BQ5T4T1 132 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 ARL6IP6Q8N6S5 226 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 OR13C6PQ8NH95 151 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 MRAP2Q96G30 205 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 TMEM136Q6ZRR5 245 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 IL36BQ9NZH7 164 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 LINC00527Q9UJ94 153 aa20.77■□□□□ 0.92
SPIRE1-202ENST00000409402 CMC4P56277 68 aaPredicted RBP20.77■□□□□ 0.91
SPIRE1-202ENST00000409402 THSD7BQ9C0I4 1608 aa20.77■□□□□ 0.91
SPIRE1-202ENST00000409402 TPTE2P1Q5T6R2 138 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 GAS1P54826 345 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 MUC21A0A0G2JKD1 596 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 MUC21A0A140T8X8 626 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 FABP5P3A8MUU1 101 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 MPTX1A8MV57 137 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 ATP5G3P48201 142 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 MUC21Q5SSG8 566 aa20.76■□□□□ 0.91
SPIRE1-202ENST00000409402 BIVMQ86UB2 503 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms