RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 TM4SF20Q53R12 229 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 UNQ9165/PRO28630Q6UXU0 137 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 LINC00322Q6ZN03 302 aaPredicted RBP6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 DEFB125Q8N687 156 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 DUSP18Q8NEJ0 188 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 DIRAS2Q96HU8 199 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 FAM110AQ9BQ89 295 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 GGTLC1Q9BX51 225 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 EDA2RQ9HAV5 297 aa6.83□□□□□ -1.32
SNORD88A-201ENST00000408314 LOC102724200A0A096LPH7 203 aaPredicted RBP6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 IGHV3-35A0A0C4DH35 117 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 TEX13DA0A0J9YY54 714 aaPredicted RBP6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 IGKV1-39P01597 117 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 IGKV1D-39P04432 117 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 FAUP35544 74 aaKnown RBP6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 RPL5P46777 297 aaKnown RBP6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 HOXA1P49639 335 aaPredicted RBP6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 OR13C8Q8NGS7 320 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 PINX1Q96BK5 328 aaKnown RBP6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 TP53RKQ96S44 253 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 ABHD1Q96SE0 405 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 TMEM222Q9H0R3 208 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 HIPK2Q9H2X6 1198 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 TMEM231Q9H6L2 316 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 SCP2D1Q9UJQ7 156 aa6.82□□□□□ -1.32
SNORD88A-201ENST00000408314 RPS10-NUDT3A0A1W2PQS6 291 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 DBX1A6NMT0 343 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 I3L2K1 104 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 UBE2CO00762 179 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 YIF1AO95070 293 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 MT-CO2P00403 227 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 CTSGP08311 255 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 ANXA3P12429 323 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 PI3P19957 117 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 EDN2P20800 178 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 MFAP2P55001 183 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 PAFAH1B2P68402 229 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 SPCS2Q15005 226 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 NOXA1Q86UR1 476 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 MARCH1Q8TCQ1 289 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 RBPMSQ93062 196 aaKnown RBP6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 NARS2Q96I59 477 aaKnown RBP6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 CHRDL1Q9BU40 450 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 NXF2Q9GZY0 626 aaKnown RBP6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 MIXL1Q9H2W2 232 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 NAA60Q9H7X0 242 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 KCNIP3Q9Y2W7 256 aa6.81□□□□□ -1.32
SNORD88A-201ENST00000408314 TRAV30A0A087WSZ9 112 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 TRAV14DV4A0A0A6YYC5 116 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 IGHV3-21A0A0B4J1V1 117 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 IGHV7-4-1A0A0J9YVY3 117 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 RBMY1BA6NDE4 496 aaKnown RBP6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 RBMY1EA6NEQ0 496 aaKnown RBP6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 CTDSP2O14595 271 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 ST8SIA3O43173 380 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 GSTZ1O43708 216 aaPredicted RBP6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 IGKV1-5P01602 117 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 RBMY1DP0C7P1 496 aaKnown RBP6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 P0C879 139 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 ADMP35318 185 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 HTR2BP41595 481 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 AP3S2P59780 193 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 SPCS3P61009 180 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 SRPXP78539 464 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 ZNF600Q6ZNG1 722 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 TMEM116Q8NCL8 245 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 OR4C16Q8NGL9 310 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 OR52E5Q8NH55 327 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 DYNC2LI1Q8TCX1 351 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 IL22RA2Q969J5 263 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 OR10C1Q96KK4 312 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 SMPXQ9UHP9 88 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 TP53TG1Q9Y2A0 90 aa6.8□□□□□ -1.32
SNORD88A-201ENST00000408314 A0A0B4J293 547 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 KIR2DL5BA0A0G2JN68 375 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 KIR2DL5BA0A0G2JPC4 375 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 A0A1W2PS18 150 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 ANKRD20A5PA0PJZ0 165 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 CRYM-AS1A6NIL9 109 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 F8W735 103 aaPredicted RBP6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 JTBO76095 146 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 CDS2O95674 445 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 OR5AC1P0C628 307 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 S100A5P33763 92 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 OPRK1P41145 380 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 EIF2B2P49770 351 aaKnown RBP6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 SP6Q3SY56 376 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 AARDQ4LEZ3 155 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 Q6ZWC4 215 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 KIR2DL5AQ8N109 375 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 TMEM217Q8N7C4 229 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 OR4D10Q8NGI6 311 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 KIR2DL5BQ8NHK3 375 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 MCFD2Q8NI22 146 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 DEDD2Q8WXF8 326 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 GALNT14Q96FL9 552 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 GRAMD2BQ96HH9 432 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 RHPN1-AS1Q9BWJ2 59 aa6.79□□□□□ -1.32
SNORD88A-201ENST00000408314 WFDC10AQ9H1F0 79 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms