RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 SLC7A5P1Q8MH63 180 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 C5orf56Q8N8D9 126 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 OR2T6Q8NHC8 308 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 PHYHIPLQ96FC7 376 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 GINS3Q9BRX5 216 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 WNT10AQ9GZT5 417 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ZNF355PQ9NSJ1 428 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 PITPNC1Q9UKF7 332 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 MAST4O15021 2626 aa2.94□□□□□ -1.94
RTN4-208ENST00000404909 ZNF705EA8MWA4 302 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 ATP6V0E1O15342 81 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 CD5LO43866 347 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 HLA-DRB1P01911 266 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 IER3P46695 156 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 FHITP49789 147 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 ELLP55199 621 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 BLCAPP62952 87 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 DEFA5Q01523 94 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 TREML4Q6UXN2 200 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 STPG2Q8N412 459 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 ZNF709Q8N972 641 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 TAF15Q92804 592 aaKnown RBP eCLIP2.93□□□□□ -1.94
RTN4-208ENST00000404909 ZNF48Q96MX3 618 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 WDR61Q9GZS3 305 aaKnown RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 NSD1Q96L73 2696 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 FN1P02751 2386 aaKnown RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 NIPBLQ6KC79 2804 aaeCLIP2.93□□□□□ -1.941e-6■■■□□ 18.2
RTN4-208ENST00000404909 A0A1B0GV50 99 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 A6NDX4 124 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 G3V318 75 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 HOXA3O43365 443 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 FSHBP01225 129 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 AMY1AP04745 511 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 SPP1P10451 314 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 MFAP2P55001 183 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 KRTAP1-1Q07627 177 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 ZNF616Q08AN1 781 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 BSXQ3C1V8 233 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 UNQ5815/PRO19632Q6UWF5 114 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 HSD17B13Q7Z5P4 300 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 OR1P1Q8NH06 330 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 RNF141Q8WVD5 230 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 GNPNAT1Q96EK6 184 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 FNDC4Q9H6D8 234 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 F11RQ9Y624 299 aaKnown RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 S4R3C0 116 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 PRSS46E5RG02 174 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 INS-IGF2F8WCM5 200 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 FGF16O43320 207 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 MT-CO2P00403 227 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 NMBP08949 121 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 SEC11BP0C7V7 166 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 CTRB1P17538 263 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 ATP5IP56385 69 aaPredicted RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 DLK1P80370 383 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 CD69Q07108 199 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 GAMTQ14353 236 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 AKR1C8PQ5T2L2 129 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 CTRB2Q6GPI1 263 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 RBMS3Q6XE24 437 aaKnown RBP2.93□□□□□ -1.94
RTN4-208ENST00000404909 Q6ZS46 218 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 SLC16A13Q7RTY0 426 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 SIGLECL1Q8N7X8 197 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 FAM213BQ8TBF2 198 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 SLC35E1Q96K37 410 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 CXorf58Q96LI9 332 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 NPCDR1Q9BY65 106 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 ARV1Q9H2C2 271 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 NPVFQ9HCQ7 196 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 PLA2G2EQ9NZK7 142 aa2.93□□□□□ -1.94
RTN4-208ENST00000404909 M0QZK8 103 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 EIF3GO75821 320 aaKnown RBP eCLIP2.92□□□□□ -1.944e-6■■■□□ 15.9
RTN4-208ENST00000404909 SCAF4O95104 1147 aaKnown RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 EGR2P11161 476 aaPredicted RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 HNF1AP20823 631 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 CAMLGP49069 296 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 RND2P52198 227 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 AANATQ16613 207 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 ASPHD1Q5U4P2 390 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 TEPPQ6URK8 271 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 Q6YL49 198 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 C9orf139Q6ZV77 190 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 SLC35E3Q7Z769 313 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 OR5R1Q8NH85 324 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 SGMS2Q8NHU3 365 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 RNASEH2CQ8TDP1 164 aaKnown RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 NPIPB3Q92617 1050 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 NOL4LQ96MY1 436 aaPredicted RBP2.92□□□□□ -1.94
RTN4-208ENST00000404909 MS4A10Q96PG2 267 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 GGACTQ9BVM4 153 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 HRH4Q9H3N8 390 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 VSIRQ9H7M9 311 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 DMRT1Q9Y5R6 373 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 RPS10-NUDT3A0A1W2PQS6 291 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 ZFP92A6NM28 416 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 C17orf112F2Z3M2 114 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 OR2J3O76001 311 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 IGHV3-23P01764 117 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 FAM157CP0CG43 387 aa2.92□□□□□ -1.94
RTN4-208ENST00000404909 GATA2P23769 480 aaPredicted RBP2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms