RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CD81P60033 236 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 HSPE1P61604 102 aaKnown RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 MRPS10P82664 201 aaKnown RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 PRCDQ00LT1 54 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 TRIM16LQ309B1 348 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 FAM106AQ4KMX7 169 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 Q56UQ5 140 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 THOC7Q6I9Y2 204 aaKnown RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 BTNL8Q6UX41 500 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 HSD17B13Q7Z5P4 300 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 GTSCR1Q86UQ5 136 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 TMEM61Q8N0U2 210 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 CADM3Q8N126 398 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR2C3Q8N628 320 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 DEFB125Q8N687 156 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 CCDC71LQ8N9Z2 235 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR51S1Q8NGJ8 323 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 OR5B3Q8NH48 314 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 MCFD2Q8NI22 146 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 LHFPL5Q8TAF8 219 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZFAND1Q8TCF1 268 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 VN1R17PQ8TDU5 208 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 RNF141Q8WVD5 230 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF486Q96H40 463 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 ZNF414Q96IQ9 312 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 TMEM56Q96MV1 263 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 RCHY1Q96PM5 261 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 TSC22D3Q99576 134 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 NEURL2Q9BR09 285 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 RTBDNQ9BSG5 229 aaPredicted RBP4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 C5orf66Q9H5L9 145 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 FKBP11Q9NYL4 201 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 C21orf62Q9NYP8 219 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 PRR13Q9NZ81 148 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 THYN1Q9P016 225 aa4.34□□□□□ -1.71
HMGB1P20-201ENST00000402555 TEX13DA0A0J9YY54 714 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 ANKRD20A5PA0PJZ0 165 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 FABP12A6NFH5 140 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 I3L2K1 104 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 CTDSPLO15194 276 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 CYB5BO43169 146 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 ST8SIA3O43173 380 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 GSTZ1O43708 216 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 MT-CO2P00403 227 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 UCP1P25874 307 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 ETV6P41212 452 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 HOXA1P49639 335 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 LINC00310P59036 64 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 SSBP1Q04837 148 aaKnown RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 MEF2DQ14814 521 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 HAGHQ16775 308 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZNF57Q68EA5 555 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 Q6ZRM9 215 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 SLC35G3Q8N808 338 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR2K2Q8NGT1 345 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR1P1Q8NH06 330 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 RNASE11Q8TAA1 199 aaKnown RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 GLYATL2Q8WU03 294 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM190Q8WZ59 177 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 PINX1Q96BK5 328 aaKnown RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 SOSTQ9BQB4 213 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 TM2D3Q9BRN9 247 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 C20orf24Q9BUV8 137 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZNF436Q9C0F3 470 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 NXF2Q9GZY0 626 aaKnown RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM222Q9H0R3 208 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 NAA60Q9H7X0 242 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 TUBA4BQ9H853 241 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 RETNQ9HD89 108 aa4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 TECRQ9NZ01 308 aaKnown RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 RSL24D1Q9UHA3 163 aaKnown RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 C14orf166Q9Y224 244 aaKnown RBP4.33□□□□□ -1.72
HMGB1P20-201ENST00000402555 RYR3Q15413 4870 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 IGHV3OR16-13A0A075B7E8 117 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 IGHV3-49A0A0A0MS15 119 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 IGHV3-74A0A0B4J1X5 117 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RBMY1BA6NDE4 496 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RBMY1EA6NEQ0 496 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 CRYM-AS1A6NIL9 109 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 A8MZ25 164 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR11H12B2RN74 326 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 NXPH3O95157 252 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 IFNA17P01571 189 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 CTSGP08311 255 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RBMY1DP0C7P1 496 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 C8orf88P0DMB2 117 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RNASE2P10153 161 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 MFAP4P55083 255 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 ERHP84090 104 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 SURF2Q15527 256 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 PYDC2Q56P42 97 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM268Q5VZI3 342 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 SELENOHQ8IZQ5 122 aaKnown RBP4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 ZNF114Q8NC26 417 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR52B4Q8NGK2 314 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 OR1L6Q8NGR2 347 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 TRIM63Q969Q1 353 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 TMEM230Q96A57 120 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 GPR146Q96CH1 333 aa4.32□□□□□ -1.72
HMGB1P20-201ENST00000402555 RRNAD1Q96FB5 475 aaKnown RBP4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms