RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TRBV7-1A0A0A6YYK4 115 aa14.79□□□□□ -0.04
HOXA9-202ENST00000396345 MPTX1A8MV57 137 aa14.79□□□□□ -0.04
HOXA9-202ENST00000396345 TRBV12-3P01733 135 aa14.79□□□□□ -0.04
HOXA9-202ENST00000396345 RNASE2P10153 161 aaKnown RBP14.79□□□□□ -0.04
HOXA9-202ENST00000396345 DCTN2Q13561 401 aaKnown RBP14.79□□□□□ -0.04
HOXA9-202ENST00000396345 VN1R17PQ8TDU5 208 aa14.79□□□□□ -0.04
HOXA9-202ENST00000396345 DTD1Q8TEA8 209 aa14.79□□□□□ -0.04
HOXA9-202ENST00000396345 IGHV3-21A0A0B4J1V1 117 aa14.78□□□□□ -0.04
HOXA9-202ENST00000396345 MED6O75586 246 aa14.78□□□□□ -0.04
HOXA9-202ENST00000396345 HTR2BP41595 481 aa14.78□□□□□ -0.04
HOXA9-202ENST00000396345 SLURP1P55000 103 aa14.78□□□□□ -0.04
HOXA9-202ENST00000396345 CCDC140Q96MF4 163 aa14.78□□□□□ -0.04
HOXA9-202ENST00000396345 SNRPGP15A8MWD9 76 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 K7EIM0 57 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 CCSO14618 274 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 ZP3P21754 424 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 HOXD3P31249 432 aaPredicted RBP14.77□□□□□ -0.05
HOXA9-202ENST00000396345 IAH1Q2TAA2 248 aaPredicted RBP14.77□□□□□ -0.05
HOXA9-202ENST00000396345 BSXQ3C1V8 233 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 C11orf87Q6NUJ2 197 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 CLEC19AQ6UXS0 136 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 ZNF502Q8TBZ5 544 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 OR10C1Q96KK4 312 aa14.77□□□□□ -0.05
HOXA9-202ENST00000396345 NOTCH3Q9UM47 2321 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 FAM25EA8MYX2 175 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 PPP5D1E7EU14 171 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 I3L2K1 104 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 BMPR1BO00238 502 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 MT-CO2P00403 227 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 C2orf83Q53S99 150 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 PVRIGQ6DKI7 326 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 ZBTB8BQ8NAP8 495 aaPredicted RBP14.76□□□□□ -0.05
HOXA9-202ENST00000396345 SLC24A4Q8NFF2 622 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 OR4D5Q8NGN0 318 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 SCARB1Q8WTV0 552 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 DCUN1D4Q92564 292 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 DLX4Q92988 240 aaPredicted RBP14.76□□□□□ -0.05
HOXA9-202ENST00000396345 PINX1Q96BK5 328 aaKnown RBP14.76□□□□□ -0.05
HOXA9-202ENST00000396345 RCC1LQ96I51 464 aaKnown RBP14.76□□□□□ -0.05
HOXA9-202ENST00000396345 MAGT1Q9H0U3 335 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 C21orf62Q9NYP8 219 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 GSKIPQ9P0R6 139 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 U3KQ87 197 aa14.76□□□□□ -0.05
HOXA9-202ENST00000396345 C5orf51A6NDU8 294 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 CORTO00230 105 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 SYNGR2O43760 224 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 IFNA10P01566 189 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 CLEC3BP05452 202 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 IAPPP10997 89 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 ARL3P36405 182 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 NKX2-1P43699 371 aaPredicted RBP14.75□□□□□ -0.05
HOXA9-202ENST00000396345 ID3Q02535 119 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 NOXA1Q86UR1 476 aa14.75□□□□□ -0.05
HOXA9-202ENST00000396345 OVOL1O14753 267 aa14.74□□□□□ -0.05
HOXA9-202ENST00000396345 GGCTO75223 188 aaKnown RBP14.74□□□□□ -0.05
HOXA9-202ENST00000396345 IGLL1P15814 213 aa14.74□□□□□ -0.05
HOXA9-202ENST00000396345 NPY1RP25929 384 aa14.74□□□□□ -0.05
HOXA9-202ENST00000396345 GPR183P32249 361 aa14.74□□□□□ -0.05
HOXA9-202ENST00000396345 RPEL1Q2QD12 228 aa14.74□□□□□ -0.05
HOXA9-202ENST00000396345 MCRIP2Q9BUT9 160 aaKnown RBP14.74□□□□□ -0.05
HOXA9-202ENST00000396345 WRBO00258 174 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 SCGB1D2O95969 90 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 MFAP4P55083 255 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 KLF5Q13887 457 aaPredicted RBP14.73□□□□□ -0.05
HOXA9-202ENST00000396345 RGS21Q2M5E4 152 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 Q56UQ5 140 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 GSG1LQ6UXU4 331 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 TMEM170AQ8WVE7 144 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 CIB3Q96Q77 187 aaPredicted RBP14.73□□□□□ -0.05
HOXA9-202ENST00000396345 ATP6V0BQ99437 205 aa14.73□□□□□ -0.05
HOXA9-202ENST00000396345 OR2T8A6NH00 312 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 OR2C1O95371 312 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 IGHV3-48P01763 117 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 OPRK1P41145 380 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 ATP5IP56385 69 aaPredicted RBP14.72□□□□□ -0.05
HOXA9-202ENST00000396345 POLR2GP62487 172 aaKnown RBP eCLIP14.72□□□□□ -0.05
HOXA9-202ENST00000396345 TATDN3Q17R31 274 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 UBAC2Q8NBM4 344 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 RNASEH2CQ8TDP1 164 aaKnown RBP14.72□□□□□ -0.05
HOXA9-202ENST00000396345 C2orf50Q96LR7 162 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 TXN2Q99757 166 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 ZC4H2Q9NQZ6 224 aa14.72□□□□□ -0.05
HOXA9-202ENST00000396345 TGOLN2O43493 480 aa14.71□□□□□ -0.05
HOXA9-202ENST00000396345 SSNA1O43805 119 aa14.71□□□□□ -0.05
HOXA9-202ENST00000396345 LY86O95711 162 aa14.71□□□□□ -0.05
HOXA9-202ENST00000396345 SYNJ2BPP57105 145 aa14.71□□□□□ -0.05
HOXA9-202ENST00000396345 RPP30P78346 268 aaKnown RBP14.71□□□□□ -0.05
HOXA9-202ENST00000396345 OXLD1Q5BKU9 147 aa14.71□□□□□ -0.05
HOXA9-202ENST00000396345 ACSM6Q6P461 480 aa14.71□□□□□ -0.05
HOXA9-202ENST00000396345 BSCL2Q96G97 398 aaPredicted RBP14.71□□□□□ -0.05
HOXA9-202ENST00000396345 GAR1Q9NY12 217 aaKnown RBP14.71□□□□□ -0.05
HOXA9-202ENST00000396345 NOTCH1P46531 2555 aa14.71□□□□□ -0.06
HOXA9-202ENST00000396345 RPS10-NUDT3A0A1W2PQS6 291 aa14.7□□□□□ -0.06
HOXA9-202ENST00000396345 SEC14L6B5MCN3 397 aa14.7□□□□□ -0.06
HOXA9-202ENST00000396345 F8W735 103 aaPredicted RBP14.7□□□□□ -0.06
HOXA9-202ENST00000396345 G3V4G9 280 aa14.7□□□□□ -0.06
HOXA9-202ENST00000396345 GOSR2O14653 212 aa14.7□□□□□ -0.06
HOXA9-202ENST00000396345 SSSCA1O60232 199 aa14.7□□□□□ -0.06
HOXA9-202ENST00000396345 IFNA4P05014 189 aa14.7□□□□□ -0.06
HOXA9-202ENST00000396345 FCGR2BP31994 310 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms