RNA–Protein interactions for RNA: ENST00000395363.5

HLA-DQA1-203, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,206 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-203ENST00000395363 TRIM16LQ309B1 348 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 ODF3L2Q3SX64 289 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 THOC7Q6I9Y2 204 aaKnown RBP8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 LPCAT3Q6P1A2 487 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 TMEM229BQ8NBD8 167 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 OR1P1Q8NH06 330 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 BSCL2Q96G97 398 aaPredicted RBP8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 DIRAS2Q96HU8 199 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 TMEM56Q96MV1 263 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 C6orf62Q9GZU0 229 aaPredicted RBP8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 THYN1Q9P016 225 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 COPZ2Q9P299 210 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 UFC1Q9Y3C8 167 aa8.65□□□□□ -1.02
HLA-DQA1-203ENST00000395363 H3BMQ9 156 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 GABARAPH6UMI1 98 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 YIF1AO95070 293 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 APOHP02749 345 aaPredicted RBP8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 CTSDP07339 412 aaPredicted RBP8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 FGF2P09038 288 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 S100GP29377 79 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TFPI2P48307 235 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TAS2R19P59542 299 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 HSPE1P61604 102 aaKnown RBP8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 MLANAQ16655 118 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RBPMS2Q6ZRY4 209 aaKnown RBP8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 ARRDC1Q8N5I2 433 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 SLC35G3Q8N808 338 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 OR1L6Q8NGR2 347 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TERB2Q8NHR7 220 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 SMIM4Q8WVI0 70 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RNF2Q99496 336 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TSC22D3Q99576 134 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RTBDNQ9BSG5 229 aaPredicted RBP8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 C5orf66Q9H5L9 145 aa8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 DAZ1Q9NQZ3 744 aaKnown RBP8.64□□□□□ -1.03
HLA-DQA1-203ENST00000395363 NDUFA4O00483 81 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 IFNA17P01571 189 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RNASE2P10153 161 aaKnown RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RPL35AP18077 110 aaKnown RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 HOXA1P49639 335 aaPredicted RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 EWSR1Q01844 656 aaKnown RBP eCLIP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 SLC16A13Q7RTY0 426 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 HSD17B13Q7Z5P4 300 aaPredicted RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 APRG1Q8IVJ8 170 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 LILRB2Q8N423 598 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 GBGT1Q8N5D6 347 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 OR51S1Q8NGJ8 323 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RNASE11Q8TAA1 199 aaKnown RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TMEM230Q96A57 120 aa8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 SLIRPQ9GZT3 109 aaKnown RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 FNDC4Q9H6D8 234 aaPredicted RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 CCDC59Q9P031 241 aaKnown RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 MRPL27Q9P0M9 148 aaKnown RBP8.63□□□□□ -1.03
HLA-DQA1-203ENST00000395363 EPPK1P58107 5090 aaKnown RBP8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 UCP1P25874 307 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 MFAP4P55083 255 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 ZNF114Q8NC26 417 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 GLYATL2Q8WU03 294 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RAB2BQ8WUD1 216 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 ST8SIA2Q92186 375 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 ZNF486Q96H40 463 aaPredicted RBP8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 OVOL2Q9BRP0 275 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 NAA60Q9H7X0 242 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 FAM212BQ9NTI7 297 aaPredicted RBP8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 FKBP11Q9NYL4 201 aa8.62□□□□□ -1.03
HLA-DQA1-203ENST00000395363 IGHV7-4-1A0A0J9YVY3 117 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 A0A1B0GU03 582 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 CHEK1O14757 476 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 NUPL2O15504 423 aaKnown RBP8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 CYB5BO43169 146 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 GNG7O60262 68 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TBPP20226 339 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 ELLP55199 621 aaPredicted RBP8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 DEFB135Q30KP9 77 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 SPSB3Q6PJ21 355 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 SELENOHQ8IZQ5 122 aaKnown RBP8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 CADM3Q8N126 398 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 FAM24BQ8N5W8 94 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 CCDC71LQ8N9Z2 235 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 MARC2Q969Z3 335 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 GPR146Q96CH1 333 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 RHPN1-AS1Q9BWJ2 59 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 GGTLC1Q9BX51 225 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 NXF2Q9GZY0 626 aaKnown RBP8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TMEM222Q9H0R3 208 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 CACNG5Q9UF02 275 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 SMPXQ9UHP9 88 aa8.61□□□□□ -1.03
HLA-DQA1-203ENST00000395363 LOC102724200A0A096LPH7 203 aaPredicted RBP8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TEX13DA0A0J9YY54 714 aaPredicted RBP8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 ANKRD20A5PA0PJZ0 165 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TSPAN4O14817 238 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 AKAIN1P0CW23 69 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TNFSF8P32971 234 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TMBIM6P55061 237 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 ERHP84090 104 aaKnown RBP8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TMEM268Q5VZI3 342 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TOMM20LQ6UXN7 152 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 GSG1LQ6UXU4 331 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 WFDC3Q8IUB2 231 aa8.6□□□□□ -1.03
HLA-DQA1-203ENST00000395363 TMEM116Q8NCL8 245 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms