RNA–Protein interactions for RNA: ENST00000394848.5

SSH2-203, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 1 (best)

Gene SSH2, Length 1,796 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-203ENST00000394848 LCN15Q6UWW0 184 aa10.04□□□□□ -0.8
SSH2-203ENST00000394848 RNASEH2CQ8TDP1 164 aaKnown RBP10.04□□□□□ -0.8
SSH2-203ENST00000394848 CACNG8Q8WXS5 425 aa10.04□□□□□ -0.8
SSH2-203ENST00000394848 AJUBAQ96IF1 538 aa10.04□□□□□ -0.8
SSH2-203ENST00000394848 RBFOX3A6NFN3 312 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 CYSRT1A8MQ03 144 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 NPFFO15130 113 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 CYB5BO43169 146 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 NDUFA3O95167 84 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 CNIH1O95406 144 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 REG1AP05451 166 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 EBI3Q14213 229 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 GAMTQ14353 236 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 SSX7Q7RTT5 188 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 TMEM144Q7Z5S9 345 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 GGTLC1Q9BX51 225 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 ACTR3CQ9C0K3 210 aaPredicted RBP10.03□□□□□ -0.8
SSH2-203ENST00000394848 MSMBP08118 114 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 SFTA3P0C7M3 94 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 FAM106CPP0CH98 169 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 AREGP15514 252 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 DEFA5Q01523 94 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 SRSF12Q8WXF0 261 aaKnown RBP10.03□□□□□ -0.8
SSH2-203ENST00000394848 RARRES2Q99969 163 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 PXMP4Q9Y6I8 212 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 MED13LQ71F56 2210 aa10.03□□□□□ -0.8
SSH2-203ENST00000394848 MAP1LC3B2A6NCE7 125 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 NCBP2LA6PVI3 153 aaKnown RBP10.02□□□□□ -0.81
SSH2-203ENST00000394848 TEX22C9J3V5 150 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 SCO1O75880 301 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 APELAP0DMC3 54 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 ADCYAP1P18509 176 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 BRS3P32247 399 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 FGF8P55075 233 aaPredicted RBP10.02□□□□□ -0.81
SSH2-203ENST00000394848 SSBP2P81877 361 aaPredicted RBP10.02□□□□□ -0.81
SSH2-203ENST00000394848 HAGHQ16775 308 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 C5orf64Q2M2E5 130 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 FBLN7Q53RD9 439 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 C10orf91Q5T1B1 145 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 MIC13Q5XKP0 118 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 FAM122CQ6P4D5 195 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 SPNS3Q6ZMD2 512 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 Q8N6K4 173 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 SSMEM1Q8WWF3 244 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 SEC11CQ9BY50 192 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 MAP1LC3BQ9GZQ8 125 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 KCNIP2Q9NS61 270 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 TNCP24821 2201 aa10.02□□□□□ -0.81
SSH2-203ENST00000394848 CTXND1A0A1B0GTU2 59 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 B4DSR2 109 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 TMEM11P17152 192 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 RPL29P47914 159 aaKnown RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 PPT1P50897 306 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 SLC16A13Q7RTY0 426 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 CIARTQ8N365 385 aaPredicted RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 ZNF114Q8NC26 417 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 OR2T6Q8NHC8 308 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 RAB24Q969Q5 203 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 SLC35E1Q96K37 410 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 SRSF8Q9BRL6 282 aaKnown RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 SMDT1Q9H4I9 107 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 ZNF469Q96JG9 3925 aaPredicted RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 ZANQ9Y493 2812 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 FLNAP21333 2647 aaKnown RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 CELSR1Q9NYQ6 3014 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 IGHV1-69DA0A0B4J2H0 117 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 HMGB3O15347 200 aaKnown RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 EIF3GO75821 320 aaKnown RBP eCLIP10.01□□□□□ -0.81
SSH2-203ENST00000394848 YIF1AO95070 293 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 IGHV1-69P01742 117 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 B2MP61769 119 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 FXYD3Q14802 87 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 TMEM249Q2WGJ8 235 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 GCSAMLQ5JQS6 135 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 FAM120AOSQ5T036 256 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 PVRIGQ6DKI7 326 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 MAPK1IP1LQ8NDC0 245 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 OR1P1Q8NH06 330 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 SLC35B3Q9H1N7 401 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 FNDC4Q9H6D8 234 aaPredicted RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 C7orf69Q9H7B7 122 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 SLC25A22Q9H936 323 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 GNG13Q9P2W3 67 aa10.01□□□□□ -0.81
SSH2-203ENST00000394848 CARHSP1Q9Y2V2 147 aaKnown RBP10.01□□□□□ -0.81
SSH2-203ENST00000394848 IGKV1OR2-108A0A075B7D4 117 aa10□□□□□ -0.81
SSH2-203ENST00000394848 IGHV3OR16-10A0A075B7F0 116 aa10□□□□□ -0.81
SSH2-203ENST00000394848 A0A1W2PPV4 95 aa10□□□□□ -0.81
SSH2-203ENST00000394848 ETFRF1Q6IPR1 90 aa10□□□□□ -0.81
SSH2-203ENST00000394848 ZNF562Q6V9R5 426 aa10□□□□□ -0.81
SSH2-203ENST00000394848 STPG3Q8N7X2 389 aa10□□□□□ -0.81
SSH2-203ENST00000394848 MISP3Q96FF7 219 aa10□□□□□ -0.81
SSH2-203ENST00000394848 ACY3Q96HD9 319 aa10□□□□□ -0.81
SSH2-203ENST00000394848 C1RLQ9NZP8 487 aa10□□□□□ -0.81
SSH2-203ENST00000394848 SLC45A2Q9UMX9 530 aa10□□□□□ -0.81
SSH2-203ENST00000394848 F11RQ9Y624 299 aaKnown RBP10□□□□□ -0.81
SSH2-203ENST00000394848 SEC14L6B5MCN3 397 aa9.99□□□□□ -0.81
SSH2-203ENST00000394848 OR10J1P30954 320 aa9.99□□□□□ -0.81
SSH2-203ENST00000394848 CDC34P49427 236 aaPredicted RBP9.99□□□□□ -0.81
SSH2-203ENST00000394848 MFAP2P55001 183 aa9.99□□□□□ -0.81
SSH2-203ENST00000394848 CX3CL1P78423 397 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms