RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.89□□□□□ -0.196e-12■■□□□ 11.8
MBD4-202ENST00000393278 AGPAT2O15120 278 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 MFAP2P55001 183 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 RAB2AP61019 212 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 CX3CL1P78423 397 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 ZNF726P1Q15940 193 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 LFNGQ8NES3 379 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 ABHD5Q8WTS1 349 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 RCC1LQ96I51 464 aaKnown RBP13.88□□□□□ -0.19
MBD4-202ENST00000393278 FNDC4Q9H6D8 234 aaPredicted RBP13.88□□□□□ -0.19
MBD4-202ENST00000393278 NAV3Q8IVL0 2385 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 SETXQ7Z333 2677 aaKnown RBP13.88□□□□□ -0.19
MBD4-202ENST00000393278 C19orf35Q6ZS72 473 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 SFT2D1Q8WV19 159 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 ARPC1AQ92747 370 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 SLC35E1Q96K37 410 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 KCNIP2Q9NS61 270 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 FAM96BQ9Y3D0 163 aa13.88□□□□□ -0.19
MBD4-202ENST00000393278 CR1P17927 2039 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 NBPF19A0A087WUL8 3843 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 TRAV1-1A0A0B4J248 108 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 BTBD17A6NE02 478 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 CORTO00230 105 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 HLA-DRB1P01911 266 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 HBE1P02100 147 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 CTRB1P17538 263 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 M6PRP20645 277 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 NDPQ00604 133 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 RAB31Q13636 194 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 ACOT6Q3I5F7 207 aaPredicted RBP13.87□□□□□ -0.19
MBD4-202ENST00000393278 CTRB2Q6GPI1 263 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 RPP25LQ8N5L8 163 aaKnown RBP13.87□□□□□ -0.19
MBD4-202ENST00000393278 BPIFCQ8NFQ6 507 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 PIFOQ8TCI5 191 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 MBD3L1Q8WWY6 194 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 PXMP4Q9Y6I8 212 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 SVEP1Q4LDE5 3571 aa13.87□□□□□ -0.19
MBD4-202ENST00000393278 IGKV1OR2-108A0A075B7D4 117 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 IGHV7-81A0A0B4J1V7 117 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 A0A1B0GV50 99 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 FBP1P09467 338 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 ZP3P21754 424 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 SRSF3P84103 164 aaKnown RBP13.86□□□□□ -0.19
MBD4-202ENST00000393278 SSX7Q7RTT5 188 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 OR10G4Q8NGN3 311 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 OR10G9Q8NGN4 311 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 OR10G7Q8NGN6 311 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 OR2T6Q8NHC8 308 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 MISP3Q96FF7 219 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 RASL11BQ9BPW5 248 aa13.86□□□□□ -0.19
MBD4-202ENST00000393278 FAM103A1Q9BTL3 118 aaKnown RBP13.86□□□□□ -0.19
MBD4-202ENST00000393278 SOX21Q9Y651 276 aaPredicted RBP13.86□□□□□ -0.19
MBD4-202ENST00000393278 MAP1AP78559 2803 aaPredicted RBP13.86□□□□□ -0.19
MBD4-202ENST00000393278 KRBOX1C9JBD0 128 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 CRYGCP07315 174 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 RPL29P47914 159 aaKnown RBP13.85□□□□□ -0.19
MBD4-202ENST00000393278 CCL20P78556 96 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 MIC13Q5XKP0 118 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 ETFRF1Q6IPR1 90 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 LINC00052Q96N35 136 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 FAM210AQ96ND0 272 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 DMRT1Q9Y5R6 373 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 YIF1AO95070 293 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 BPIFB3P59826 476 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 B2MP61769 119 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 ACY3Q96HD9 319 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 RBM14Q96PK6 669 aaKnown RBP13.85□□□□□ -0.19
MBD4-202ENST00000393278 SSX3Q99909 188 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 SCRT1Q9BWW7 348 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 WNT10AQ9GZT5 417 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 TMEM231Q9H6L2 316 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 SLC45A2Q9UMX9 530 aa13.85□□□□□ -0.19
MBD4-202ENST00000393278 CD5P06127 495 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 PRR20EP86478 221 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 PRR20CP86479 221 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 PRR20DP86480 221 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 PRR20BP86481 221 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 PRR20AP86496 221 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 ASPHD1Q5U4P2 390 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 LCN15Q6UWW0 184 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 STPG3Q8N7X2 389 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 C5orf56Q8N8D9 126 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 SLC25A33Q9BSK2 321 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 ACTR3CQ9C0K3 210 aaPredicted RBP13.84□□□□□ -0.19
MBD4-202ENST00000393278 SLC39A9Q9NUM3 307 aa13.84□□□□□ -0.19
MBD4-202ENST00000393278 MRPL36Q9P0J6 103 aaKnown RBP13.84□□□□□ -0.19
MBD4-202ENST00000393278 CTXND1A0A1B0GTU2 59 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 MAP1LC3B2A6NCE7 125 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 NPIPB5A8MRT5 1133 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 TSPAN9O75954 239 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 EGR2P11161 476 aaPredicted RBP13.83□□□□□ -0.2
MBD4-202ENST00000393278 OR10J1P30954 320 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 GUK1Q16774 197 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 GCSAMLQ5JQS6 135 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 FAM122CQ6P4D5 195 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 OR1L6Q8NGR2 347 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 NPIPB3Q92617 1050 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 NARS2Q96I59 477 aaKnown RBP13.83□□□□□ -0.2
MBD4-202ENST00000393278 HSPB9Q9BQS6 159 aa13.83□□□□□ -0.2
MBD4-202ENST00000393278 MAP1LC3BQ9GZQ8 125 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms