RNA–Protein interactions for RNA: ENST00000381835.9

CIITA-202, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 1 (best) BASIC

Gene CIITA, Length 2,344 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-202ENST00000381835 DUTP33316 252 aaKnown RBP10.08□□□□□ -0.8
CIITA-202ENST00000381835 FAM3BP58499 235 aaPredicted RBP10.08□□□□□ -0.8
CIITA-202ENST00000381835 CENPVQ7Z7K6 275 aaPredicted RBP10.08□□□□□ -0.8
CIITA-202ENST00000381835 GATAD1Q8WUU5 269 aa10.08□□□□□ -0.8
CIITA-202ENST00000381835 ACY3Q96HD9 319 aa10.08□□□□□ -0.8
CIITA-202ENST00000381835 ELOVL1Q9BW60 279 aa10.08□□□□□ -0.8
CIITA-202ENST00000381835 BEX4Q9NWD9 120 aaPredicted RBP10.08□□□□□ -0.8
CIITA-202ENST00000381835 IGHV2-26A0A0B4J1V2 119 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 RAMP3O60896 148 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 FOXH1O75593 365 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 MBP02144 154 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 RBP4P02753 201 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 ATP6V1FQ16864 119 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 LBHQ53QV2 105 aaPredicted RBP10.07□□□□□ -0.8
CIITA-202ENST00000381835 ANAPC16Q96DE5 110 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 S1PR3Q99500 378 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 MANBALQ9NQG1 85 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 UNC79Q9P2D8 2635 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 A8MWP6 167 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 M0R1W7 72 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 KRASP01116 189 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 ZNF816Q0VGE8 651 aaPredicted RBP10.07□□□□□ -0.8
CIITA-202ENST00000381835 COA6Q5JTJ3 125 aaKnown RBP10.07□□□□□ -0.8
CIITA-202ENST00000381835 FFAR4Q5NUL3 377 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 ZNF664Q8N3J9 261 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 PNKDQ8N490 385 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.07□□□□□ -0.8
CIITA-202ENST00000381835 CCDC168Q8NDH2 2452 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 TMEM170AQ8WVE7 144 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 TMEM37Q8WXS4 190 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 NOL4LQ96MY1 436 aaPredicted RBP10.07□□□□□ -0.8
CIITA-202ENST00000381835 TMEM147Q9BVK8 224 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 CLEC7AQ9BXN2 247 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 HSPB7Q9UBY9 170 aa10.07□□□□□ -0.8
CIITA-202ENST00000381835 IGHV2-70DA0A0C4DH43 119 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 GCGP01275 180 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 G6PCP35575 357 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 BRWD1-AS2P59051 145 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 PAX2Q02962 417 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 USF2Q15853 346 aaPredicted RBP10.06□□□□□ -0.8
CIITA-202ENST00000381835 OR2T10Q8NGZ9 312 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 RAB24Q969Q5 203 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 FUT9Q9Y231 359 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 PAGE4O60829 102 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 FCGR3BO75015 233 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 REG1BP48304 166 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 LINC00311Q8N616 119 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 ZNF709Q8N972 641 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 C8orf31Q8N9H6 132 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 OR5T1Q8NG75 326 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 OR10P1Q8NGE3 313 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 MISP3Q96FF7 219 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 NEU1Q99519 415 aa10.06□□□□□ -0.8
CIITA-202ENST00000381835 SLC25A16P16260 332 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 USF1P22415 310 aaPredicted RBP10.05□□□□□ -0.8
CIITA-202ENST00000381835 SRP14P37108 136 aaKnown RBP10.05□□□□□ -0.8
CIITA-202ENST00000381835 PRRX1P54821 245 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 RPS16P62249 146 aaKnown RBP10.05□□□□□ -0.8
CIITA-202ENST00000381835 KLRD1Q13241 179 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 DIAPH2-AS1Q14236 149 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 ACTL10Q5JWF8 245 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 VMO1Q7Z5L0 202 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 ZNF596Q8TC21 504 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 C2orf88Q9BSF0 95 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.05□□□□□ -0.8
CIITA-202ENST00000381835 PRRC2AP48634 2157 aaKnown RBP10.05□□□□□ -0.8
CIITA-202ENST00000381835 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.05□□□□□ -0.8
CIITA-202ENST00000381835 PRSS47A8MTI9 375 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 PRTN3P24158 256 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 ACOT6Q3I5F7 207 aaPredicted RBP10.05□□□□□ -0.8
CIITA-202ENST00000381835 Q5PR19 223 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 KCNIP4Q6PIL6 250 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 LRRC75A-AS1Q8N1F1 130 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 TMEM18Q96B42 140 aa10.05□□□□□ -0.8
CIITA-202ENST00000381835 A0A1W2PRD5 423 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 A0A1W2PRF3 423 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 A0A1W2PRM7 423 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 GGCTO75223 188 aaKnown RBP10.04□□□□□ -0.8
CIITA-202ENST00000381835 S1PR2O95136 353 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 VENTXO95231 258 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 IGLV1-47P01700 117 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 SNRPCP09234 159 aaKnown RBP10.04□□□□□ -0.8
CIITA-202ENST00000381835 CT45A6P0DMU7 189 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 CT45A5P0DMU8 189 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 CT45A7P0DMV0 189 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 HLA-DRB5Q30154 266 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 C1orf122Q6ZSJ8 110 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 ZNF833PQ6ZTB9 187 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 KIR3DL3Q8N743 410 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 TNFRSF14Q92956 283 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 TMEM186Q96B77 213 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 NPCDR1Q9BY65 106 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 TOX4O94842 621 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 THBS3P49746 956 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 AARDQ4LEZ3 155 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 MRPL41Q8IXM3 137 aaKnown RBP10.04□□□□□ -0.8
CIITA-202ENST00000381835 TCTEX1D1Q8N7M0 179 aa10.04□□□□□ -0.8
CIITA-202ENST00000381835 DTD1Q8TEA8 209 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms