RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 DOK5Q9P104 306 aa8.89□□□□□ -0.99
NEDD9-201ENST00000379433 A0A1B0GU03 582 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 RAB5AP20339 215 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 AGMATQ9BSE5 352 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 ZNF665Q9H7R5 613 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 HEYLQ9NQ87 328 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-201ENST00000379433 MMP26Q9NRE1 261 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 RNF115Q9Y4L5 304 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 RNF212BA8MTL3 300 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 FGF16O43320 207 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 OR9G9P0C7N8 305 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 PPIAL4GP0DN37 164 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 F2RL1P55085 397 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 CT45A1Q5HYN5 189 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 OR4A16Q8NH70 328 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 CT45A3Q8NHU0 189 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 SAA2-SAA4A0A096LPE2 208 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 IGHV3-48P01763 117 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 CD3EP07766 207 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 SAA2P0DJI9 122 aaPredicted RBP8.88□□□□□ -0.99
NEDD9-201ENST00000379433 OR4A47Q6IF82 309 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 ABHD12Q8N2K0 398 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 GAFA1Q96PS6 74 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 SIGMAR1Q99720 223 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 CACFD1Q9UGQ2 172 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 PTPN13Q12923 2485 aa8.88□□□□□ -0.99
NEDD9-201ENST00000379433 OR2J3O76001 311 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 PAX5Q02548 391 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 PAX2Q02962 417 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 DIAPH2-AS1Q14236 149 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 ZNF295-AS1Q8N0V1 137 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 RNASE6Q93091 150 aaKnown RBP8.87□□□□□ -0.99
NEDD9-201ENST00000379433 ISOC2Q96AB3 205 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 OR4C12Q96R67 309 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 OR6C3Q9NZP0 311 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 GNG13Q9P2W3 67 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 WSB1Q9Y6I7 421 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 DFFBO76075 338 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 MSMO1Q15800 293 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 MRPL52Q86TS9 123 aaKnown RBP8.87□□□□□ -0.99
NEDD9-201ENST00000379433 NECAP1Q8NC96 275 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 VPREB3Q9UKI3 123 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 PPIAL4AQ9Y536 164 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 RAI1Q7Z5J4 1906 aaPredicted RBP8.87□□□□□ -0.99
NEDD9-201ENST00000379433 ZNF785A8K8V0 405 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 IGKV1-16P04430 117 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 DUTP33316 252 aaKnown RBP8.87□□□□□ -0.99
NEDD9-201ENST00000379433 UQCRFS1P47985 274 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 SULT1A1P50225 295 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 TCL1AP56279 114 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 TIRAPP58753 221 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 SLC38A11Q08AI6 406 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 RPS10P5Q9NQ39 176 aa8.87□□□□□ -0.99
NEDD9-201ENST00000379433 GAPDHP04406 335 aaKnown RBP8.86□□□□□ -0.99
NEDD9-201ENST00000379433 DANCRP0C864 163 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 ERVK-16P61578 105 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 C17orf58Q2M2W7 97 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 OR52E5Q8NH55 327 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 SMIM8Q96KF7 97 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 ATP5SQ99766 215 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 VKORC1Q9BQB6 163 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 TMEM106BQ9NUM4 274 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 ELOVL5Q9NYP7 299 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 CCDC168Q8NDH2 2452 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 KBTBD11-OT1A0A1B0GTJ5 212 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 B5MCH6 92 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 LHBP01229 141 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 ADH4P08319 380 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 OR5G3P0C626 314 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 COX7A1P24310 79 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 RPS10P46783 165 aaKnown RBP8.86□□□□□ -0.99
NEDD9-201ENST00000379433 LOXL3P58215 753 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 JOSD1Q15040 202 aaPredicted RBP8.86□□□□□ -0.99
NEDD9-201ENST00000379433 HAPLN4Q86UW8 402 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 RAB40CQ96S21 281 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 SLC25A22Q9H936 323 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 LAMP3Q9UQV4 416 aa8.86□□□□□ -0.99
NEDD9-201ENST00000379433 SHISA9B4DS77 424 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 DVL1O14640 695 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 PITX3O75364 302 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 GATA3P23771 443 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 KLRB1Q12918 225 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 IFI27L2Q9H2X8 130 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 PPDPFQ9H3Y8 114 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 IGHV2-70DA0A0C4DH43 119 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 F5H768 121 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 TFF3Q07654 80 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 STUMQ69YW2 141 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 OR9G4Q8NGQ1 327 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 RAX2Q96IS3 184 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 CSDC2Q9Y534 153 aaKnown RBP8.85□□□□□ -0.99
NEDD9-201ENST00000379433 CELSR2Q9HCU4 2923 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 ZFHX3Q15911 3703 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 TRAV38-1A0A0B4J264 116 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 NDUFB3O43676 98 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 SEC11BP0C7V7 166 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 PSG1P11464 419 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 HBG1P69891 147 aa8.85□□□□□ -0.99
NEDD9-201ENST00000379433 HBG2P69892 147 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms