RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 I3L2K1 104 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 CD33P20138 364 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 ID3Q02535 119 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 OR4D5Q8NGN0 318 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 ZNF502Q8TBZ5 544 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 DTD1Q8TEA8 209 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 SCARB1Q8WTV0 552 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 OR10C1Q96KK4 312 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 ATP6V0BQ99437 205 aa14.41□□□□□ -0.1
SSU72-203ENST00000378725 IGHV3-23P01764 117 aa14.4□□□□□ -0.1
SSU72-203ENST00000378725 ZP3P21754 424 aa14.4□□□□□ -0.1
SSU72-203ENST00000378725 SLURP1P55000 103 aa14.4□□□□□ -0.1
SSU72-203ENST00000378725 DCTN2Q13561 401 aaKnown RBP14.4□□□□□ -0.1
SSU72-203ENST00000378725 C2orf83Q53S99 150 aa14.4□□□□□ -0.1
SSU72-203ENST00000378725 DCUN1D4Q92564 292 aa14.4□□□□□ -0.1
SSU72-203ENST00000378725 DLX4Q92988 240 aaPredicted RBP14.4□□□□□ -0.1
SSU72-203ENST00000378725 S4R3C0 116 aa14.4□□□□□ -0.1
SSU72-203ENST00000378725 U3KQ87 197 aa14.4□□□□□ -0.1
SSU72-203ENST00000378725 VWFP04275 2813 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 CORTO00230 105 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 BMPR1BO00238 502 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 MED6O75586 246 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 MT-CO2P00403 227 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 CLEC3BP05452 202 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 HOXD3P31249 432 aaPredicted RBP14.39□□□□□ -0.11
SSU72-203ENST00000378725 KLF5Q13887 457 aaPredicted RBP14.39□□□□□ -0.11
SSU72-203ENST00000378725 C11orf87Q6NUJ2 197 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 CLEC19AQ6UXS0 136 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 UXS1Q8NBZ7 420 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 MISP3Q96FF7 219 aa14.39□□□□□ -0.11
SSU72-203ENST00000378725 RCC1LQ96I51 464 aaKnown RBP14.39□□□□□ -0.11
SSU72-203ENST00000378725 F8W735 103 aaPredicted RBP14.38□□□□□ -0.11
SSU72-203ENST00000378725 SYNGR2O43760 224 aa14.38□□□□□ -0.11
SSU72-203ENST00000378725 ATP5IP56385 69 aaPredicted RBP14.38□□□□□ -0.11
SSU72-203ENST00000378725 IAH1Q2TAA2 248 aaPredicted RBP14.38□□□□□ -0.11
SSU72-203ENST00000378725 ZBTB8BQ8NAP8 495 aaPredicted RBP14.38□□□□□ -0.11
SSU72-203ENST00000378725 SLC24A4Q8NFF2 622 aa14.38□□□□□ -0.11
SSU72-203ENST00000378725 TMEM170AQ8WVE7 144 aa14.38□□□□□ -0.11
SSU72-203ENST00000378725 C21orf62Q9NYP8 219 aa14.38□□□□□ -0.11
SSU72-203ENST00000378725 WNK1Q9H4A3 2382 aa14.37□□□□□ -0.11
SSU72-203ENST00000378725 IGHV3-21A0A0B4J1V1 117 aa14.37□□□□□ -0.11
SSU72-203ENST00000378725 PPP5D1E7EU14 171 aa14.37□□□□□ -0.11
SSU72-203ENST00000378725 GGCTO75223 188 aaKnown RBP14.37□□□□□ -0.11
SSU72-203ENST00000378725 FCGR2BP31994 310 aaPredicted RBP14.37□□□□□ -0.11
SSU72-203ENST00000378725 NKX2-1P43699 371 aaPredicted RBP14.37□□□□□ -0.11
SSU72-203ENST00000378725 NOXA1Q86UR1 476 aa14.37□□□□□ -0.11
SSU72-203ENST00000378725 TXN2Q99757 166 aa14.37□□□□□ -0.11
SSU72-203ENST00000378725 MCRIP2Q9BUT9 160 aaKnown RBP14.37□□□□□ -0.11
SSU72-203ENST00000378725 MAGT1Q9H0U3 335 aa14.37□□□□□ -0.11
SSU72-203ENST00000378725 CCSO14618 274 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 OVOL1O14753 267 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 LY86O95711 162 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 IGLL1P15814 213 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 NPY1RP25929 384 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 ARL3P36405 182 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 RPEL1Q2QD12 228 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 SAMD5Q5TGI4 173 aa14.36□□□□□ -0.11
SSU72-203ENST00000378725 RNASEH2CQ8TDP1 164 aaKnown RBP14.36□□□□□ -0.11
SSU72-203ENST00000378725 PINX1Q96BK5 328 aaKnown RBP14.36□□□□□ -0.11
SSU72-203ENST00000378725 CIB3Q96Q77 187 aaPredicted RBP14.36□□□□□ -0.11
SSU72-203ENST00000378725 IFNA10P01566 189 aa14.35□□□□□ -0.11
SSU72-203ENST00000378725 GPR183P32249 361 aa14.35□□□□□ -0.11
SSU72-203ENST00000378725 MFAP4P55083 255 aa14.35□□□□□ -0.11
SSU72-203ENST00000378725 OXLD1Q5BKU9 147 aa14.35□□□□□ -0.11
SSU72-203ENST00000378725 GPHB5Q86YW7 130 aa14.35□□□□□ -0.11
SSU72-203ENST00000378725 C2orf50Q96LR7 162 aa14.35□□□□□ -0.11
SSU72-203ENST00000378725 FNDC4Q9H6D8 234 aaPredicted RBP14.35□□□□□ -0.11
SSU72-203ENST00000378725 GAR1Q9NY12 217 aaKnown RBP14.35□□□□□ -0.11
SSU72-203ENST00000378725 GSKIPQ9P0R6 139 aa14.35□□□□□ -0.11
SSU72-203ENST00000378725 PKD1L1Q8TDX9 2849 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 C7orf66A4D0T2 115 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 C5orf51A6NDU8 294 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 OR2C1O95371 312 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 IAPPP10997 89 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 POLR2GP62487 172 aaKnown RBP eCLIP14.34□□□□□ -0.11
SSU72-203ENST00000378725 IL15RAQ13261 267 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 MLANAQ16655 118 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 TATDN3Q17R31 274 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 RGS21Q2M5E4 152 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 SPSB3Q6PJ21 355 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 GSG1LQ6UXU4 331 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 C1QL4Q86Z23 238 aa14.34□□□□□ -0.11
SSU72-203ENST00000378725 BSCL2Q96G97 398 aaPredicted RBP14.34□□□□□ -0.11
SSU72-203ENST00000378725 OR2T8A6NH00 312 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 C15orf62A8K5M9 175 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 FAM25EA8MYX2 175 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 G3V4G9 280 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 WRBO00258 174 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 TGOLN2O43493 480 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 WIPF1O43516 503 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 IGHV3-48P01763 117 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 MBPP02686 304 aaPredicted RBP14.33□□□□□ -0.12
SSU72-203ENST00000378725 CTSGP08311 255 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 SYNJ2BPP57105 145 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 RPP30P78346 268 aaKnown RBP14.33□□□□□ -0.12
SSU72-203ENST00000378725 Q56UQ5 140 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 ACSM6Q6P461 480 aa14.33□□□□□ -0.12
SSU72-203ENST00000378725 RPS10-NUDT3A0A1W2PQS6 291 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 LGALS9O00182 355 aa14.32□□□□□ -0.12
SSU72-203ENST00000378725 ADMP35318 185 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms