RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 PRO1933Q9H354 126 aa9.52□□□□□ -0.89
TNFRSF9-201ENST00000377507 SAP30LQ9HAJ7 183 aa9.52□□□□□ -0.89
TNFRSF9-201ENST00000377507 KAAG1Q9UBP8 84 aa9.52□□□□□ -0.89
TNFRSF9-201ENST00000377507 PLCE1Q9P212 2302 aa9.52□□□□□ -0.89
TNFRSF9-201ENST00000377507 GGTLC3B5MD39 225 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 SLC17A3O00476 420 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 NUPR1O60356 82 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 CHRNB4P30926 498 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 GNG4P50150 75 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 CENPWQ5EE01 88 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 UNQ6494/PRO21346Q6UXR6 183 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 ASCL5Q7RTU5 278 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 TMEM256Q8N2U0 113 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 OSTCQ9NRP0 149 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 TMEM106BQ9NUM4 274 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 ZNF835Q9Y2P0 537 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 TNCP24821 2201 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 TTC28Q96AY4 2481 aa9.51□□□□□ -0.89
TNFRSF9-201ENST00000377507 TRBV9A0A0B4J1U6 114 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 ISLRO14498 428 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 NDUFB3O43676 98 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 IGLV2-8P01709 118 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 RAB4BP61018 213 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 WT1-ASQ06250 92 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 IQCJQ1A5X6 159 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 RPEL1Q2QD12 228 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 MMD2Q8IY49 270 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 Q8NA96 180 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 OR2T6Q8NHC8 308 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 TP53TG3Q9ULZ0 132 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 OR7C2O60412 319 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 CBLN1P23435 193 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 PPOXP50336 477 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 OR5I1Q13606 314 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 DIAPH2-AS1Q14236 149 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 LRRC10Q5BKY1 277 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 PVRIGQ6DKI7 326 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 LYPD2Q6UXB3 125 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 MRPL41Q8IXM3 137 aaKnown RBP9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 BEND2Q8NDZ0 799 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 RNASE6Q93091 150 aaKnown RBP9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 ABHD17AQ96GS6 310 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 IGF2BP2-AS1Q96M15 143 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 SLC25A2Q9BXI2 301 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 GNB1LQ9BYB4 327 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 DNAJC4Q9NNZ3 241 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 CTSZQ9UBR2 303 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 WASHC3Q9Y3C0 194 aa9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 CNOT1A5YKK6 2376 aaKnown RBP9.5□□□□□ -0.89
TNFRSF9-201ENST00000377507 YLPM1P49750 1951 aaKnown RBP9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 ICE1Q9Y2F5 2266 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 VSTM5A8MXK1 200 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 LOXP28300 417 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 LINC00310P59036 64 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 CX3CL1P78423 397 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 MRGPRG-AS1Q2M3A8 158 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 TMEM155Q4W5P6 130 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 C11orf42Q8N5U0 333 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 THAP8Q8NA92 274 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 OR10X1Q8NGY0 326 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 CCL17Q92583 94 aa9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 MRPL18Q9H0U6 180 aaKnown RBP9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 FNDC4Q9H6D8 234 aaPredicted RBP9.49□□□□□ -0.89
TNFRSF9-201ENST00000377507 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 A0A1B0GUS0 222 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 ZNF705GA8MUZ8 300 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 FSTL3O95633 263 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 MC5RP33032 325 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 REG1BP48304 166 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 SUB1P53999 127 aaKnown RBP eCLIP9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 SUMO1P63165 101 aaKnown RBP9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 PAFAH1B2P68402 229 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 Q0VG73 95 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 TIGITQ495A1 244 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 MORN5Q5VZ52 161 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 ZNF430Q9H8G1 570 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 TCRBV4S1A1TA0A5B7 111 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 SHISA9B4DS77 424 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 LGALS7P47929 136 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 TAS2R60P59551 318 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 COX19Q49B96 90 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 LBHQ53QV2 105 aaPredicted RBP9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 OR1L6Q8NGR2 347 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 H1FXQ92522 213 aaKnown RBP9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 CDC42EP3Q9UKI2 254 aa9.48□□□□□ -0.89
TNFRSF9-201ENST00000377507 TRAV5A0A0B4J249 113 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 SMIM27A0A1W2PRY6 76 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 CRYGCP07315 174 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 FRMD6-AS1P0C7T7 363 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 IGHV1-8P0DP01 117 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 CRISP2P16562 243 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 SSBP2P81877 361 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 GFRALQ6UXV0 394 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 PATE2Q6UY27 113 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 DMRTC2Q8IXT2 367 aaPredicted RBP9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 OR8I2Q8N0Y5 310 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 ST6GALNAC3Q8NDV1 305 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 PRSS33Q8NF86 280 aa9.47□□□□□ -0.89
TNFRSF9-201ENST00000377507 OR1L4Q8NGR5 311 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms