RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 IGHV5-10-1A0A0J9YXX1 117 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 ERVH48-1M5A8F1 160 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 LY6EQ16553 131 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 C9orf153Q5TBE3 101 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 FABP5P3A8MUU1 101 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 HLA-DQB1P01920 261 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 EGR1P18146 543 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 PEAR1Q5VY43 1037 aaPredicted RBP9.89□□□□□ -0.83
VPS13A-205ENST00000376636 Q96M66 194 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 CXCL16Q9H2A7 254 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 DUTP33316 252 aaKnown RBP9.89□□□□□ -0.83
VPS13A-205ENST00000376636 TMEM54Q969K7 222 aa9.89□□□□□ -0.83
VPS13A-205ENST00000376636 TRGV11A0A075B6L2 103 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 OTORQ9NRC9 128 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 FOXA2Q9Y261 457 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-205ENST00000376636 PLPPR1Q8TBJ4 325 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 TMEM170AQ8WVE7 144 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-205ENST00000376636 ARPC1AQ92747 370 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 J3QW42 95 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 SIGLEC14Q08ET2 396 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 PNKDQ8N490 385 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 OR10W1Q8NGF6 305 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 INAFM2P0DMQ5 153 aa9.88□□□□□ -0.83
VPS13A-205ENST00000376636 HOXB3P14651 431 aaPredicted RBP9.88□□□□□ -0.83
VPS13A-205ENST00000376636 PAX4O43316 350 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 C1orf100Q5SVJ3 147 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 C21orf62Q9NYP8 219 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 ACACAQ13085 2346 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 RHOGP84095 191 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 B9A039 149 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 CHAC1Q9BUX1 264 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 IGHV1-69-2A0A0G2JMI3 117 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 SPINK8P0C7L1 97 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 COX5BP10606 129 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 COL9A1P20849 921 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 LINC01465Q8N7H1 131 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 ZNF721Q8TF20 911 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 IGHV1OR15-9A0A0B4J2B8 117 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 MESP2Q0VG99 397 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 KLHDC2Q9Y2U9 406 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.87□□□□□ -0.839e-7■■■■■ 31.2
VPS13A-205ENST00000376636 PGFP49763 221 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 CACNA1GO43497 2377 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 CD5LO43866 347 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 Q6ZS52 159 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 PRTN3P24158 256 aa9.87□□□□□ -0.83
VPS13A-205ENST00000376636 UPK3AO75631 287 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 EGR4Q05215 589 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 GAGE2AQ6NT46 116 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 ZNF385AQ96PM9 386 aaKnown RBP9.86□□□□□ -0.83
VPS13A-205ENST00000376636 PEX11BO96011 259 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 KLF14Q8TD94 323 aaPredicted RBP9.86□□□□□ -0.83
VPS13A-205ENST00000376636 IFI27L2Q9H2X8 130 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 HAPLN4Q86UW8 402 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 RASL11AQ6T310 242 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 PLEKHB2Q96CS7 222 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 PRADC1Q9BSG0 188 aa9.86□□□□□ -0.83
VPS13A-205ENST00000376636 UBE2CO00762 179 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 DUSP14O95147 198 aaKnown RBP9.85□□□□□ -0.83
VPS13A-205ENST00000376636 ADMP35318 185 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 CXCL10P02778 98 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 FAM60AQ9NP50 221 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 SLC25A38Q96DW6 304 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 FBXL7Q9UJT9 491 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 GVINP1Q7Z2Y8 2422 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 IFITM2Q01629 132 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 TNFRSF14Q92956 283 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 ANAPC10Q9UM13 185 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 A8MXK9 166 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 GTSF1LQ9H1H1 148 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 HTN3P15516 51 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 TMEM258P61165 79 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 TGIF1Q15583 401 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 KLF4O43474 513 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 MYEOVQ96EZ4 313 aa9.85□□□□□ -0.83
VPS13A-205ENST00000376636 CCL20P78556 96 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 ZP1P60852 638 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 C1orf162Q8NEQ5 155 aaPredicted RBP9.84□□□□□ -0.83
VPS13A-205ENST00000376636 CHCHD5Q9BSY4 110 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 INS-IGF2F8WCM5 200 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 INSP01308 110 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 IGHV3-48P01763 117 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 IFI27L1Q96BM0 104 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 RNASE7Q9H1E1 156 aaKnown RBP9.84□□□□□ -0.83
VPS13A-205ENST00000376636 SBF2Q86WG5 1849 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 KCNK17Q96T54 332 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 PVRIGQ6DKI7 326 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 FOXD3Q9UJU5 478 aaPredicted RBP9.84□□□□□ -0.83
VPS13A-205ENST00000376636 A0A0G2JMM0 328 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 A0A1W2PPB8 328 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 KIR3DP1A8MWS1 328 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 ATXN7O15265 892 aaPredicted RBP9.84□□□□□ -0.83
VPS13A-205ENST00000376636 IGFBP2P18065 325 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 ZNF826PQ6ZT77 177 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 PILRBQ9UKJ0 227 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 LY75O60449 1722 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 IGHV3-66A0A0C4DH42 116 aa9.84□□□□□ -0.83
VPS13A-205ENST00000376636 ZIC3O60481 467 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms