RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 PTTG1IPP53801 180 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 HSPE1P61604 102 aaKnown RBP9.09□□□□□ -0.95
CCDC40-203ENST00000374877 UTF1Q5T230 341 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 OR4A47Q6IF82 309 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 Q6ZVH6 145 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 NIT1Q86X76 327 aa9.09□□□□□ -0.95
CCDC40-203ENST00000374877 HEATR1Q9H583 2144 aaKnown RBP9.08□□□□□ -0.96
CCDC40-203ENST00000374877 GGTLC3B5MD39 225 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 NDUFB8O95169 186 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 LINC00869P0C866 280 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 PRRX1P54821 245 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 ALKBH2Q6NS38 261 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 C1orf229Q6ZS94 237 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-203ENST00000374877 ZNRF1Q8ND25 227 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 TSKUQ8WUA8 353 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 ZNF331Q9NQX6 463 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-203ENST00000374877 TECRQ9NZ01 308 aaKnown RBP9.08□□□□□ -0.96
CCDC40-203ENST00000374877 SAA2-SAA4A0A096LPE2 208 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 GUSBP1Q15486 140 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 KLHDC1Q8N7A1 406 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 CORO2AQ92828 525 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 SVILO95425 2214 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 ICE1Q9Y2F5 2266 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 COX19Q49B96 90 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 OR2Z1Q8NG97 314 aa9.08□□□□□ -0.96
CCDC40-203ENST00000374877 SLC25A10Q9UBX3 287 aaPredicted RBP9.08□□□□□ -0.96
CCDC40-203ENST00000374877 ISLRO14498 428 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 SLAQ13239 276 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 STUMQ69YW2 141 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 FAM90A1Q86YD7 464 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 ZNF439Q8NDP4 499 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 IGKV1D-17A0A075B6S4 117 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 HSBP1O75506 76 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 ZNF503Q96F45 646 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 TRIB1Q96RU8 372 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 AKAP13Q12802 2813 aa9.07□□□□□ -0.96
CCDC40-203ENST00000374877 KIR2DS2P43631 304 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 LOXL3P58215 753 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 UNQ5815/PRO19632Q6UWF5 114 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 Q8NA96 180 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 PPP1R35Q8TAP8 253 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 FAM168AQ92567 244 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 NEUROG1Q92886 237 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 LINC00479Q96M42 142 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 CLEC7AQ9BXN2 247 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 OR51B2Q9Y5P1 312 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 CADP27708 2225 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 DSPP15924 2871 aaKnown RBP9.06□□□□□ -0.96
CCDC40-203ENST00000374877 MGST3O14880 152 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 TAS2R45P59539 299 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 MLANAQ16655 118 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 Q56UQ5 140 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 C19orf35Q6ZS72 473 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 FAM214BQ7L5A3 538 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 LYG1Q8N1E2 194 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 TMEM14BQ9NUH8 114 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 CALYQ9NYX4 217 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 IDI2-AS1Q9NZ38 188 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 IGKV1OR2-108A0A075B7D4 117 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 J3QR06 171 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 IGLV2-8P01709 118 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 SAA2P0DJI9 122 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-203ENST00000374877 MFAP2P55001 183 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 C18orf32Q8TCD1 76 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 ZNF355PQ9NSJ1 428 aa9.06□□□□□ -0.96
CCDC40-203ENST00000374877 FOXA2Q9Y261 457 aaPredicted RBP9.06□□□□□ -0.96
CCDC40-203ENST00000374877 APC2O95996 2303 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 SMIM27A0A1W2PRY6 76 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 IZUMO1RA6ND01 250 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 MBD3L4A6NDZ8 208 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-203ENST00000374877 MBD3L3A6NE82 208 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-203ENST00000374877 MBD3L5A6NJ08 208 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-203ENST00000374877 CCL25O15444 150 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 CECR9P0C854 216 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 TSPOP30536 169 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 PPOXP50336 477 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 PRR31Q5SQ13 230 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 OR9G1Q8NH87 305 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 MBD3L2Q8NHZ7 208 aaPredicted RBP9.05□□□□□ -0.96
CCDC40-203ENST00000374877 DDB2Q92466 427 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 MMP23AO75900 390 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 GNG10P50151 68 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 TNXAQ16473 311 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 PRR27Q6MZM9 219 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 RNASEKQ6P5S7 137 aaKnown RBP9.05□□□□□ -0.96
CCDC40-203ENST00000374877 ARL2-SNX15V9GYD0 113 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 M0R2Z0 102 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 UBE2L3P68036 154 aaKnown RBP9.05□□□□□ -0.96
CCDC40-203ENST00000374877 CT45A1Q5HYN5 189 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 Q6ZT83 130 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 CT45A3Q8NHU0 189 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 FAM57AQ8TBR7 257 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 PRORYQ9H606 182 aa9.05□□□□□ -0.96
CCDC40-203ENST00000374877 TRAV5A0A0B4J249 113 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 FAM87AP0C7U9 286 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 GPR6P46095 362 aaPredicted RBP9.04□□□□□ -0.96
CCDC40-203ENST00000374877 C1orf185Q5T7R7 199 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 ZNF71Q9NQZ8 489 aaPredicted RBP9.04□□□□□ -0.96
CCDC40-203ENST00000374877 BET1LQ9NYM9 111 aa9.04□□□□□ -0.96
CCDC40-203ENST00000374877 IGKV3-15P01624 115 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms