RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 OSTCQ9NRP0 149 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 YTHDF2Q9Y5A9 579 aaKnown RBP8.29□□□□□ -1.08
TPM3-209ENST00000368527 DSCAML1Q8TD84 2053 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 URB1O60287 2271 aaKnown RBP8.29□□□□□ -1.08
TPM3-209ENST00000368527 CEP250Q9BV73 2442 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 DYSFO75923 2080 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 A0A0U1RQK1 487 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 ZNF320A2RRD8 509 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 IFITM10A6NMD0 228 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 ISLRO14498 428 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 COX7A2P2O60397 106 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 OR7C2O60412 319 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 IGHV2-70P01814 119 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 SOD3P08294 240 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 FOXC1Q12948 553 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 PYY3Q5JQD4 70 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 MIR17HGQ75NE6 70 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 S100A7AQ86SG5 101 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 DMRTC2Q8IXT2 367 aaPredicted RBP8.28□□□□□ -1.08
TPM3-209ENST00000368527 ST6GALNAC3Q8NDV1 305 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 SGMS2Q8NHU3 365 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 EAF1Q96JC9 268 aaPredicted RBP8.28□□□□□ -1.08
TPM3-209ENST00000368527 TRGV9Q99603 122 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 HIST1H2BLQ99880 126 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 CLEC7AQ9BXN2 247 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 DCAF16Q9NXF7 216 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 TRAPPC1Q9Y5R8 145 aa8.28□□□□□ -1.08
TPM3-209ENST00000368527 HCFC1P51610 2035 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.27□□□□□ -1.09
TPM3-209ENST00000368527 TSTD3H0UI37 97 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 GATCO43716 136 aaKnown RBP8.27□□□□□ -1.09
TPM3-209ENST00000368527 IGLV2-23P01705 113 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 FABP4P15090 132 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
TPM3-209ENST00000368527 RPL15P61313 204 aaKnown RBP8.27□□□□□ -1.09
TPM3-209ENST00000368527 ZNF90Q03938 601 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 KLRB1Q12918 225 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 JOSD1Q15040 202 aaPredicted RBP8.27□□□□□ -1.09
TPM3-209ENST00000368527 PRSS8Q16651 343 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 RPEL1Q2QD12 228 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 UTF1Q5T230 341 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 C10orf113Q5VZT2 155 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 RASL11AQ6T310 242 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 LYPD2Q6UXB3 125 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 ZCCHC24Q8N2G6 241 aaKnown RBP8.27□□□□□ -1.09
TPM3-209ENST00000368527 OR8B3Q8NGG8 313 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 OCC1Q8TAD7 63 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 PERPQ96FX8 193 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 TIMD4Q96H15 378 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 OR8B2Q96RD0 313 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 RAB1BQ9H0U4 201 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 CTSZQ9UBR2 303 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 RNF24Q9Y225 148 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 DSCAMO60469 2012 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 DMXL1Q9Y485 3027 aa8.27□□□□□ -1.09
TPM3-209ENST00000368527 CNOT1A5YKK6 2376 aaKnown RBP8.26□□□□□ -1.09
TPM3-209ENST00000368527 IGLV1-47P01700 117 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 CRYGCP07315 174 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 CEACAM3P40198 252 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 PKIAP61925 76 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 UBE2L3P68036 154 aaKnown RBP8.26□□□□□ -1.09
TPM3-209ENST00000368527 ZNF672Q499Z4 452 aaPredicted RBP8.26□□□□□ -1.09
TPM3-209ENST00000368527 C4orf17Q53FE4 359 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 SPATA31B1PQ5VZV4 182 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 MUC15Q8N387 334 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 OR5T1Q8NG75 326 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 NEU4Q8WWR8 484 aaPredicted RBP8.26□□□□□ -1.09
TPM3-209ENST00000368527 RBM14Q96PK6 669 aaKnown RBP8.26□□□□□ -1.09
TPM3-209ENST00000368527 DERL1Q9BUN8 251 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 ELOVL1Q9BW60 279 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 SCNM1Q9BWG6 230 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 GNB1LQ9BYB4 327 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 SH3BGRL2Q9UJC5 107 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 CDC42EP3Q9UKI2 254 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 INSIG2Q9Y5U4 225 aa8.26□□□□□ -1.09
TPM3-209ENST00000368527 RAI1Q7Z5J4 1906 aaPredicted RBP8.26□□□□□ -1.09
TPM3-209ENST00000368527 SPTBN2O15020 2390 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 TRBV20OR9-2A0A075B6H5 130 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 IGKV1OR2-108A0A075B7D4 117 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 IGHV2-26A0A0B4J1V2 119 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 PSMB11A5LHX3 300 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 SLC25A17O43808 307 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 LIPFP07098 398 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 CRYGBP07316 175 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 DEFA4P12838 97 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 PLP1P60201 277 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 ERVFC1-1P60608 527 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 PAFAH1B2P68402 229 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 WT1-ASQ06250 92 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 CENPWQ5EE01 88 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 FAM231DQ6ZW35 169 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 TMEM116Q8NCL8 245 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 OR10W1Q8NGF6 305 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 TMEM37Q8WXS4 190 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 NOL4LQ96MY1 436 aaPredicted RBP8.25□□□□□ -1.09
TPM3-209ENST00000368527 PAXXQ9BUH6 204 aa8.25□□□□□ -1.09
TPM3-209ENST00000368527 TPRP12270 2363 aaKnown RBP8.24□□□□□ -1.09
TPM3-209ENST00000368527 PPIAL4CA0A0B4J2A2 164 aa8.24□□□□□ -1.09
TPM3-209ENST00000368527 IGLC7A0M8Q6 106 aa8.24□□□□□ -1.09
TPM3-209ENST00000368527 OOSP1A8MZH6 123 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms