RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 PFN4Q8NHR9 129 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 RASSF5Q8WWW0 418 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 TMEM106AQ96A25 262 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 C8orf76Q96K31 380 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 CCDC42Q96M95 316 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 NIPSNAP1Q9BPW8 284 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 VPS29Q9UBQ0 182 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 ALPK2Q86TB3 2170 aa0.94□□□□□ -2.26
ECHDC1-201ENST00000368287 OR4C46A6NHA9 309 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 BUB1B-PAK6H3BSN5 160 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 KPNA3O00505 521 aaPredicted RBP0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 CNIH1O95406 144 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 TCRBP04435 133 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 FKBP2P26885 142 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 RANP62826 216 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 RPL22L1Q6P5R6 122 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 DCXRQ7Z4W1 244 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 TRAPPC5Q8IUR0 188 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 LRRC25Q8N386 305 aaPredicted RBP0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 TERB2Q8NHR7 220 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 C11orf40Q8WZ69 217 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 H1FXQ92522 213 aaKnown RBP0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 TSPAN32Q96QS1 320 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 OR52E6Q96RD3 313 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 REG4Q9BYZ8 158 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 PRTFDC1Q9NRG1 225 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 SOX21Q9Y651 276 aaPredicted RBP0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 SCN10AQ9Y5Y9 1956 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 ROBO3Q96MS0 1386 aa0.93□□□□□ -2.26
ECHDC1-201ENST00000368287 PLB1Q6P1J6 1458 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 EML6Q6ZMW3 1958 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 ECM29Q5VYK3 1845 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 A0A087WUJ7 227 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 IGKV2-40A0A087WW87 121 aaPredicted RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 TRAV26-2A0A0B4J265 109 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 IGKV3D-7A0A0C4DH55 119 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 IGKV3OR2-268A0A0C4DH90 116 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 EXOC1LA0A1B0GW35 172 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 DPRXA6NFQ7 191 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 MRPS14O60783 128 aaKnown RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 IGKV2D-40P01614 121 aaPredicted RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 CTSDP07339 412 aaPredicted RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 SERPINA6P08185 405 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 METTL15P1P0C7V9 234 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 RNASE3P12724 160 aaKnown RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 IL9P15248 144 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 NFYAP23511 347 aaPredicted RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 G6PCP35575 357 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 PSME3P61289 254 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 AESQ08117 197 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 NDUFA5Q16718 116 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 WFDC11Q8NEX6 87 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 OR13C4Q8NGS5 318 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 YIPF3Q9GZM5 350 aa0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 RNASE7Q9H1E1 156 aaKnown RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 NCOA6Q14686 2063 aaPredicted RBP0.92□□□□□ -2.26
ECHDC1-201ENST00000368287 TECTAO75443 2155 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 MYO3BQ8WXR4 1341 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 DOCK3Q8IZD9 2030 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 TOPBP1Q92547 1522 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 SMIM9A6NGZ8 99 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 GOLGA6L19H0YKK7 550 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 TTRP02766 147 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 SPI1P17947 270 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 CTAG1AP78358 180 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 SPANXN3Q5MJ09 141 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 C10orf55Q5SWW7 151 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 AAED1Q7RTV5 226 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 DNAJC9Q8WXX5 260 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 TOMM6Q96B49 74 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 DCUN1D1Q96GG9 259 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 TMEM147Q9BVK8 224 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 ULBP3Q9BZM4 244 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 C14orf105Q9NVL8 296 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 TMEM56-RWDD3S4R434 201 aa0.91□□□□□ -2.26
ECHDC1-201ENST00000368287 ROS1P08922 2347 aa0.9□□□□□ -2.26
ECHDC1-201ENST00000368287 TNRC6BQ9UPQ9 1833 aaKnown RBP0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 IGKV3-7A0A075B6H7 116 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 TRAV9-1A0A075B6T8 112 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 PQLC2LA1A4F0 135 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 HCRTO43612 131 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 OR2J2O76002 312 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 CRYZL1O95825 349 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 HTR1AP08908 422 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 DEFA3P59666 94 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 CDC42P60953 191 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 STX5Q13190 355 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 SPOPLQ6IQ16 392 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 ZNF826PQ6ZT77 177 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 RPS19BP1Q86WX3 136 aaKnown RBP0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 MCFD2Q8NI22 146 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 SCGB3A1Q96QR1 104 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 CKLFQ9UBR5 152 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 PRELID3BQ9Y3B1 194 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 NUP155O75694 1391 aa0.9□□□□□ -2.27
ECHDC1-201ENST00000368287 CEP192Q8TEP8 1941 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 CACNA1BQ00975 2339 aa0.89□□□□□ -2.27
ECHDC1-201ENST00000368287 RPP14O95059 124 aaKnown RBP0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms