RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 MYO7BQ6PIF6 2116 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 TRBV6-7A0A0A0MS04 114 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 C17orf98A8MV24 154 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 SNAI2O43623 268 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 RNFT1Q5M7Z0 435 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 FAM57AQ8TBR7 257 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 CHTOPQ9Y3Y2 248 aaKnown RBP11.14□□□□□ -0.63
PTPRK-204ENST00000368210 ANAPC1Q9H1A4 1944 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 RAB9AP51151 201 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 FOXG1P55316 489 aaPredicted RBP11.14□□□□□ -0.63
PTPRK-204ENST00000368210 FAM71F2Q6NXP2 309 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 PLPPR1Q8TBJ4 325 aa11.14□□□□□ -0.63
PTPRK-204ENST00000368210 IGKV1D-13A0A0B4J2D9 117 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 IGKV1-13P0DP09 117 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF146Q15072 292 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 IGKV3-7A0A075B6H7 116 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 IGKV1D-8A0A087WSZ0 117 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 TRAV8-2A0A0B4J237 113 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 ARL14EPLP0DKL9 152 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 FAM216BQ8N7L0 139 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 TMEM56-RWDD3S4R434 201 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 DIDO1Q9BTC0 2240 aaKnown RBP11.13□□□□□ -0.63
PTPRK-204ENST00000368210 F5H697 171 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 C8orf88P0DMB2 117 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 MEF2CQ06413 473 aaPredicted RBP11.13□□□□□ -0.63
PTPRK-204ENST00000368210 GAGE13Q4V321 117 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 OR10J3Q5JRS4 329 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 SAMD5Q5TGI4 173 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 LINC01560Q8TB33 94 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 KBTBD11-OT1A0A1B0GTJ5 212 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 LOC389332A0A1B0GUA5 103 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 CD5LO43866 347 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 FAM106CPP0CH98 169 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 OR4A5Q8NH83 315 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 CLEC7AQ9BXN2 247 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 DOCK7Q96N67 2140 aa11.13□□□□□ -0.63
PTPRK-204ENST00000368210 IGKV1-12A0A0C4DH73 117 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 IGKV1D-12P01611 117 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 CSRP1P21291 193 aaKnown RBP11.12□□□□□ -0.63
PTPRK-204ENST00000368210 APOBEC3AP31941 199 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-204ENST00000368210 HSD52Q0P140 79 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 FXYD3Q14802 87 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 FAM166AQ6J272 317 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 BMPERQ8N8U9 685 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 OR52E5Q8NH55 327 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 SPRR3Q9UBC9 169 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF407Q9C0G0 2248 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 A0A0G2JLM5 398 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 TYMSP04818 313 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 SNRNP40Q96DI7 357 aaKnown RBP11.12□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF414Q96IQ9 312 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 MS4A6AQ9H2W1 248 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 POLR3KQ9Y2Y1 108 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-204ENST00000368210 H0YIZ8 118 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 FHL1Q13642 323 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 UFC1Q9Y3C8 167 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 PGPA6NDG6 321 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 ATP5IP56385 69 aaPredicted RBP11.12□□□□□ -0.63
PTPRK-204ENST00000368210 PRNTQ86SH4 94 aa11.12□□□□□ -0.63
PTPRK-204ENST00000368210 SPINK8P0C7L1 97 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 GFRA1P56159 465 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 PLAURQ03405 335 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 KLRB1Q12918 225 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 DMRTC2Q8IXT2 367 aaPredicted RBP11.11□□□□□ -0.63
PTPRK-204ENST00000368210 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 Q0VFX4 171 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 FAM90A1Q86YD7 464 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 NABP2Q9BQ15 211 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 TMSB15BA0A087X1C1 80 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 PGPEP1LA6NFU8 196 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 TM4SF5O14894 197 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 BSPH1Q075Z2 132 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 MPV17L2Q567V2 206 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 VOPP1Q96AW1 172 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 SCN8AQ9UQD0 1980 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 REG1AP05451 166 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 RPL30P62888 115 aaKnown RBP11.11□□□□□ -0.63
PTPRK-204ENST00000368210 LRRC75BQ2VPJ9 315 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 NPIPB3Q92617 1050 aa11.11□□□□□ -0.63
PTPRK-204ENST00000368210 HEATR5AQ86XA9 2040 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 HEATR1Q9H583 2144 aaKnown RBP11.1□□□□□ -0.63
PTPRK-204ENST00000368210 STPG3Q8N7X2 389 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 OSR1Q8TAX0 266 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF502Q8TBZ5 544 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 DMRTA2Q96SC8 542 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 CYTL1Q9NRR1 136 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 MPDZO75970 2070 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 WNK2Q9Y3S1 2297 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 PCNX1Q96RV3 2341 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 IGHV3-48P01763 117 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 FER1L6-AS1Q8NA97 138 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 C19orf24Q9BVV8 132 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 PNRC2Q9NPJ4 139 aaKnown RBP11.1□□□□□ -0.63
PTPRK-204ENST00000368210 FER1L5A0AVI2 2057 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 KIAA2026Q5HYC2 2103 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 DNM1P46Q6ZS02 220 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.1□□□□□ -0.63
PTPRK-204ENST00000368210 OR51G1Q8NGK1 321 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 C18orf12Q96KH6 178 aa11.1□□□□□ -0.63
PTPRK-204ENST00000368210 NPCDR1Q9BY65 106 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms