RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 TNFRSF9Q07011 255 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 FHL3Q13643 280 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 ANKRD55Q3KP44 614 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 FAM106AQ4KMX7 169 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 OXLD1Q5BKU9 147 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 SPSB3Q6PJ21 355 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 FANCD2OSQ96PS1 177 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 PEMTQ9UBM1 199 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 TBC1D24Q9ULP9 559 aa11.93□□□□□ -0.5
PRKN-203ENST00000366894 ANKRD34BA5PLL1 514 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 OVOL1O14753 267 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 PRH1P02810 166 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 PRB2P02812 416 aaPredicted RBP11.92□□□□□ -0.5
PRKN-203ENST00000366894 HOXB5P09067 269 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 MFAP4P55083 255 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 C9orf66Q5T8R8 295 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 Q6ZRM9 215 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 ZNF431Q8TF32 576 aaPredicted RBP11.92□□□□□ -0.5
PRKN-203ENST00000366894 HSPB7Q9UBY9 170 aa11.92□□□□□ -0.5
PRKN-203ENST00000366894 KMT2CQ8NEZ4 4911 aaKnown RBP11.91□□□□□ -0.5
PRKN-203ENST00000366894 DBX1A6NMT0 343 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 WRBO00258 174 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 NDUFB8O95169 186 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 NPBWR1P48145 328 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 RAB11AP62491 216 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 IZUMO4Q1ZYL8 232 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 DEFB136Q30KP8 78 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 GGNBP1Q5YKI7 109 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 MRAPQ8TCY5 172 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 RNASEH2CQ8TDP1 164 aaKnown RBP11.91□□□□□ -0.5
PRKN-203ENST00000366894 BSCL2Q96G97 398 aaPredicted RBP11.91□□□□□ -0.5
PRKN-203ENST00000366894 OR4C12Q96R67 309 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 C21orf62Q9NYP8 219 aa11.91□□□□□ -0.5
PRKN-203ENST00000366894 A0A0G2JRQ6 117 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 SNRPGP15A8MWD9 76 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 IFNA10P01566 189 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 CLEC3BP05452 202 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 IGLL1P15814 213 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 HOXD3P31249 432 aaPredicted RBP11.9□□□□□ -0.5
PRKN-203ENST00000366894 ARL3P36405 182 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 GPHB5Q86YW7 130 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 C12orf45Q8N5I9 185 aaPredicted RBP11.9□□□□□ -0.5
PRKN-203ENST00000366894 DTD1Q8TEA8 209 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 MISP3Q96FF7 219 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 DUX3Q96PT4 197 aa11.9□□□□□ -0.5
PRKN-203ENST00000366894 IGHV4OR15-8A0A075B7B6 117 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 TRAV30A0A087WSZ9 112 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 A0A087WW49 117 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 INMT-MINDY4F8WBC2 141 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 NUPL2O15504 423 aaKnown RBP11.89□□□□□ -0.51
PRKN-203ENST00000366894 PITX3O75364 302 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 FCGR2BP31994 310 aaPredicted RBP11.89□□□□□ -0.51
PRKN-203ENST00000366894 RELQ04864 619 aaPredicted RBP11.89□□□□□ -0.51
PRKN-203ENST00000366894 C2orf83Q53S99 150 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 CLEC19AQ6UXS0 136 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 NRARPQ7Z6K4 114 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 UXS1Q8NBZ7 420 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 SLC24A4Q8NFF2 622 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 SCARB1Q8WTV0 552 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 MARVELD1Q9BSK0 173 aa11.89□□□□□ -0.51
PRKN-203ENST00000366894 SEC14L6B5MCN3 397 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 SYNGR2O43760 224 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 PTTG1O95997 202 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 SLC25A4P12235 298 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 NKX2-1P43699 371 aaPredicted RBP11.88□□□□□ -0.51
PRKN-203ENST00000366894 KLF5Q13887 457 aaPredicted RBP11.88□□□□□ -0.51
PRKN-203ENST00000366894 Q56UQ5 140 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 ZNF502Q8TBZ5 544 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 DCUN1D4Q92564 292 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 PINX1Q96BK5 328 aaKnown RBP11.88□□□□□ -0.51
PRKN-203ENST00000366894 RBKSQ9H477 322 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 PRR13Q9NZ81 148 aa11.88□□□□□ -0.51
PRKN-203ENST00000366894 C5orf51A6NDU8 294 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 LGALS9O00182 355 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 GNG7O60262 68 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 SCAF4O95104 1147 aaKnown RBP11.87□□□□□ -0.51
PRKN-203ENST00000366894 MT-CO2P00403 227 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 NPY1RP25929 384 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 OPRK1P41145 380 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 CYCSP99999 105 aaKnown RBP11.87□□□□□ -0.51
PRKN-203ENST00000366894 IFITM3Q01628 133 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 IAH1Q2TAA2 248 aaPredicted RBP11.87□□□□□ -0.51
PRKN-203ENST00000366894 SPINK9Q5DT21 86 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 GSG1LQ6UXU4 331 aa11.87□□□□□ -0.51
PRKN-203ENST00000366894 DLX4Q92988 240 aaPredicted RBP11.87□□□□□ -0.51
PRKN-203ENST00000366894 IFNA4P05014 189 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 RNASE2P10153 161 aaKnown RBP11.86□□□□□ -0.51
PRKN-203ENST00000366894 PVALBP20472 110 aaPredicted RBP11.86□□□□□ -0.51
PRKN-203ENST00000366894 GPX4P36969 197 aaPredicted RBP11.86□□□□□ -0.51
PRKN-203ENST00000366894 ID3Q02535 119 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 BSXQ3C1V8 233 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 PVRIGQ6DKI7 326 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 ACSM6Q6P461 480 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 OR9G4Q8NGQ1 327 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 CACNG8Q8WXS5 425 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 SIGLEC8Q9NYZ4 499 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 GSKIPQ9P0R6 139 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 UFC1Q9Y3C8 167 aa11.86□□□□□ -0.51
PRKN-203ENST00000366894 I3L2K1 104 aa11.85□□□□□ -0.51
PRKN-203ENST00000366894 TGOLN2O43493 480 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms