RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 ATP5HO75947 161 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 RBP1P09455 135 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 METTL15P1P0C7V9 234 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 EIF2B2P49770 351 aaKnown RBP1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 DEFA1P59665 94 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 ARHGAP11BQ3KRB8 267 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR52L1Q8NGH7 329 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR51A2Q8NGJ7 313 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 TERB2Q8NHR7 220 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 SCGB3A1Q96QR1 104 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 C14orf105Q9NVL8 296 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 BAIAP2Q9UQB8 552 aa1.4□□□□□ -2.19
RNU6-28P-201ENST00000362378 CUL9Q8IWT3 2517 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 PCF11O94913 1555 aaKnown RBP1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 KIAA2026Q5HYC2 2103 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 RTL1A6NKG5 1358 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 F8W036 122 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 BUB1B-PAK6H3BSN5 160 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 ORC5O43913 435 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR2J2O76002 312 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR7C1O76099 320 aaPredicted RBP1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 ZNF682O95780 498 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 SERPINE1P05121 402 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 ZNF705BP0CI00 300 aaPredicted RBP1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 GPX2P18283 190 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 CAPZBP47756 277 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 C10orf126Q8N4M7 172 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR8B3Q8NGG8 313 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 MBD3L1Q8WWY6 194 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 TMEM106AQ96A25 262 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 SIGMAR1Q99720 223 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 CCDC90BQ9GZT6 254 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 RNASE7Q9H1E1 156 aaKnown RBP1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 CST9LQ9H4G1 147 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 LHFPL6Q9Y693 200 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 PTPRBP23467 1997 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 ZFHX2Q9C0A1 2572 aaPredicted RBP1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 TTC21AQ8NDW8 1320 aa1.39□□□□□ -2.19
RNU6-28P-201ENST00000362378 KIF13BQ9NQT8 1826 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 DOCK5Q9H7D0 1870 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 TRGV2A0A075B6R0 118 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 TRAPPC13A5PLN9 417 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 SDCBPO00560 298 aaPredicted RBP1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 CST2P09228 141 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 AKR1C3P42330 323 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 CDC42P60953 191 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 MRPS25P82663 173 aaKnown RBP1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 ZNF345Q14585 488 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 ELOBQ15370 118 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 Q1T7F1 81 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 LIN52Q52LA3 116 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 TEX36Q5VZQ5 186 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 FAM173BQ6P4H8 233 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 MIR17HGQ75NE6 70 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 KRT222Q8N1A0 295 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 ZNF439Q8NDP4 499 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 BTF3L4Q96K17 158 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 PSTPIP2Q9H939 334 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 NMNAT1Q9HAN9 279 aaPredicted RBP1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 UQCC1Q9NVA1 299 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 ARL2BPQ9Y2Y0 163 aa1.38□□□□□ -2.19
RNU6-28P-201ENST00000362378 TONSLQ96HA7 1378 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 DOCK10Q96BY6 2186 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 hCG_1818297A0A087WSY0 165 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 A8MT66 165 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 C19orf84I3L1E1 186 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 C8GP07360 202 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 CYBAP13498 195 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 PPIBP23284 216 aaKnown RBP1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 TMED2Q15363 201 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 DEFB128Q7Z7B8 93 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 BPIFA4PQ86YQ2 179 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 ZNF563Q8TA94 476 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 DGCR14Q96DF8 476 aaKnown RBP1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 C2orf50Q96LR7 162 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 KIFC1Q9BW19 673 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 SLC39A9Q9NUM3 307 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 CKLFQ9UBR5 152 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 ERGIC3Q9Y282 383 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 GLI3P10071 1580 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 NUMA1Q14980 2115 aa1.37□□□□□ -2.19
RNU6-28P-201ENST00000362378 STRCQ7RTU9 1775 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 FN1P02751 2386 aaKnown RBP1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 COL4A1P02462 1669 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 FAM159BA6NKW6 160 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 SERPINA1P01009 418 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 PMP2P02689 132 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 HTR1AP08908 422 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 COX6A1P12074 109 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 ARF6P62330 175 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 NNATQ16517 81 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 RIC1Q4ADV7 1423 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 LCN15Q6UWW0 184 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 CLVS1Q8IUQ0 354 aaPredicted RBP1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 SIGLECL1Q8N7X8 197 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 Q96M85 177 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 YIPF3Q9GZM5 350 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 RNF122Q9H9V4 155 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 CYSLTR1Q9Y271 337 aa1.36□□□□□ -2.19
RNU6-28P-201ENST00000362378 OR2B3O76000 313 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms