RNA–Protein interactions for RNA: ENST00000361125.1

SMURF1-201, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene SMURF1, Length 5,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-201ENST00000361125 FOLR2P14207 255 aa17.55■□□□□ 0.4
SMURF1-201ENST00000361125 GTF3AQ92664 365 aaKnown RBP17.55■□□□□ 0.4
SMURF1-201ENST00000361125 FBLL1A6NHQ2 334 aaKnown RBP17.55■□□□□ 0.4
SMURF1-201ENST00000361125 C15orf61A6NNL5 157 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 NPFFO15130 113 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 RNASE4P34096 147 aaKnown RBP17.54■□□□□ 0.4
SMURF1-201ENST00000361125 LEMD1Q68G75 181 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 Q9H3A6 140 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 CEP290O15078 2479 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 OR9G9P0C7N8 305 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 LGALS3P17931 250 aaKnown RBP17.54■□□□□ 0.4
SMURF1-201ENST00000361125 ALPK2Q86TB3 2170 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 IMMP2LQ96T52 175 aa17.54■□□□□ 0.4
SMURF1-201ENST00000361125 CD5P06127 495 aa17.53■□□□□ 0.4
SMURF1-201ENST00000361125 CCL20P78556 96 aa17.53■□□□□ 0.4
SMURF1-201ENST00000361125 IGKV1-27A0A075B6S5 117 aa17.53■□□□□ 0.4
SMURF1-201ENST00000361125 GNG5P63218 68 aa17.53■□□□□ 0.4
SMURF1-201ENST00000361125 CA7P43166 264 aa17.53■□□□□ 0.4
SMURF1-201ENST00000361125 SUPT4H1P63272 117 aaKnown RBP17.53■□□□□ 0.4
SMURF1-201ENST00000361125 HIST1H4GQ99525 98 aa17.53■□□□□ 0.4
SMURF1-201ENST00000361125 FAM166AQ6J272 317 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 FMC1Q96HJ9 113 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 PLSCR4Q9NRQ2 329 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 IL36BQ9NZH7 164 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 UBE2CO00762 179 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 LHFPL1Q86WI0 220 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 C5orf63A6NC05 138 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 ASIPP42127 132 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 OR4X2Q8NGF9 303 aa17.52■□□□□ 0.4
SMURF1-201ENST00000361125 TMEM262E9PQX1 116 aa17.52■□□□□ 0.39
SMURF1-201ENST00000361125 KIR2DL4Q99706 377 aa17.52■□□□□ 0.39
SMURF1-201ENST00000361125 SELLP14151 372 aa17.52■□□□□ 0.39
SMURF1-201ENST00000361125 RPL23P62829 140 aaKnown RBP17.52■□□□□ 0.39
SMURF1-201ENST00000361125 CACNG8Q8WXS5 425 aa17.52■□□□□ 0.39
SMURF1-201ENST00000361125 WDR81Q562E7 1941 aa17.52■□□□□ 0.39
SMURF1-201ENST00000361125 COL25A1Q9BXS0 654 aaPredicted RBP17.51■□□□□ 0.39
SMURF1-201ENST00000361125 LOC107984156A0A0G2JMH3 177 aa17.51■□□□□ 0.39
SMURF1-201ENST00000361125 ARL17AQ8IVW1 177 aa17.51■□□□□ 0.39
SMURF1-201ENST00000361125 VWA8A3KMH1 1905 aa17.51■□□□□ 0.39
SMURF1-201ENST00000361125 E9PQ18 207 aa17.51■□□□□ 0.39
SMURF1-201ENST00000361125 DUX3Q96PT4 197 aa17.51■□□□□ 0.39
SMURF1-201ENST00000361125 PRB4P10163 310 aaPredicted RBP17.51■□□□□ 0.39
SMURF1-201ENST00000361125 FAM131CQ96AQ9 280 aa17.51■□□□□ 0.39
SMURF1-201ENST00000361125 TIMP3P35625 211 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 ADIPOQQ15848 244 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 GLMPQ8WWB7 406 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 COLCA2A8K830 154 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 C18orf15Q96N68 181 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 TIMM23O14925 209 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 VDAC2P45880 294 aaPredicted RBP17.5■□□□□ 0.39
SMURF1-201ENST00000361125 LHFPL4Q7Z7J7 247 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 THADAQ6YHU6 1953 aa17.5■□□□□ 0.39
SMURF1-201ENST00000361125 DUTP33316 252 aaKnown RBP17.49■□□□□ 0.39
SMURF1-201ENST00000361125 IL18BPO95998 194 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 RP1P56715 2156 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 TMEM238LA0A1B0GVL6 79 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 A6NJY4 79 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 PRSS2P07478 247 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 TAS2R60P59551 318 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 PRELID3AQ96N28 172 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 RPP21Q9H633 154 aaKnown RBP17.49■□□□□ 0.39
SMURF1-201ENST00000361125 TSC2P49815 1807 aa17.49■□□□□ 0.39
SMURF1-201ENST00000361125 PSMB11A5LHX3 300 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 ID3Q02535 119 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 LRTM2Q8N967 370 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 MOB4Q9Y3A3 225 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 C12orf54Q6X4T0 127 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 SLC25A34Q6PIV7 304 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 TMEM144Q7Z5S9 345 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 OR10W1Q8NGF6 305 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 PNRC2Q9NPJ4 139 aaKnown RBP17.48■□□□□ 0.39
SMURF1-201ENST00000361125 NUTF2P61970 127 aaKnown RBP17.48■□□□□ 0.39
SMURF1-201ENST00000361125 CTAG1AP78358 180 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 HEPN1Q6WQI6 88 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 TMEM160Q9NX00 188 aa17.48■□□□□ 0.39
SMURF1-201ENST00000361125 FHL1Q13642 323 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 ZNF672Q499Z4 452 aaPredicted RBP17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BKO60814 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BJP06899 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BOP23527 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BBP33778 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BDP58876 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BCP62807 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST2H2BEQ16778 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.47■□□□□ 0.39
SMURF1-201ENST00000361125 MDS2Q8NDY4 140 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BHQ93079 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BNQ99877 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 HIST1H2BMQ99879 126 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 TRAV40A0A0B4J280 105 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 A0A0G2JNJ9 132 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 LILRA1O75019 489 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 RNASE1P07998 156 aaKnown RBP17.47■□□□□ 0.39
SMURF1-201ENST00000361125 C5orf24Q7Z6I8 188 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 Q9UFV3 132 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 LINC00527Q9UJ94 153 aa17.47■□□□□ 0.39
SMURF1-201ENST00000361125 GEMIN7Q9H840 131 aaKnown RBP17.47■□□□□ 0.39
SMURF1-201ENST00000361125 STAG3L2P0CL84 134 aa17.46■□□□□ 0.39
SMURF1-201ENST00000361125 PYYP10082 97 aa17.46■□□□□ 0.39
SMURF1-201ENST00000361125 MEIG1Q5JSS6 88 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms