RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 HIST1H2BNQ99877 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BMQ99879 126 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 KLF12Q9Y4X4 402 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 HAX1O00165 279 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 MAJINQ3KP22 176 aa7.9□□□□□ -1.15
VPS13A-203ENST00000360280 DOPEY2Q9Y3R5 2298 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 IGHV1OR15-9A0A0B4J2B8 117 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 ABHD17AQ96GS6 310 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 GFRA3O60609 400 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 ADMP35318 185 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 ITLN1Q8WWA0 313 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 RSPO3Q9BXY4 272 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-203ENST00000360280 ZNF385AQ96PM9 386 aaKnown RBP7.89□□□□□ -1.15
VPS13A-203ENST00000360280 ITGB1BP1O14713 200 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 TRGV3P03979 118 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 C9orf153Q5TBE3 101 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 SRP19P09132 144 aaKnown RBP7.89□□□□□ -1.15
VPS13A-203ENST00000360280 PNKDQ8N490 385 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 LEPROTO15243 131 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 JMJD8Q96S16 334 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 FOXH1O75593 365 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 YBX2Q9Y2T7 364 aaKnown RBP7.89□□□□□ -1.15
VPS13A-203ENST00000360280 IGKV3D-20A0A0C4DH25 116 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 PLSCR4Q9NRQ2 329 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 UPK3AO75631 287 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 CD7P09564 240 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 AHDC1Q5TGY3 1603 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-203ENST00000360280 DRAM1Q8N682 238 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 CACNG8Q8WXS5 425 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 GGTLC1Q9BX51 225 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 HS3ST3B1Q9Y662 390 aa7.89□□□□□ -1.15
VPS13A-203ENST00000360280 ZNF708P17019 499 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 SLC50A1Q9BRV3 221 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 CD200R1LQ6Q8B3 271 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 OTORQ9NRC9 128 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 NPIPB13A6NJU9 1138 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 PEAR1Q5VY43 1037 aaPredicted RBP7.88□□□□□ -1.15
VPS13A-203ENST00000360280 C2orf82Q6UX34 121 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 ZPLD1Q8TCW7 415 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 AHRRA9YTQ3 701 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 KLF14Q8TD94 323 aaPredicted RBP7.88□□□□□ -1.15
VPS13A-203ENST00000360280 RNF115Q9Y4L5 304 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 NTN1O95631 604 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 IFITM3Q01628 133 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 TMEM242Q9NWH2 141 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 RNASE7Q9H1E1 156 aaKnown RBP7.88□□□□□ -1.15
VPS13A-203ENST00000360280 HRKO00198 91 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 DRD3P35462 400 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 OR10W1Q8NGF6 305 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 FBLIM1Q8WUP2 373 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 LINC01587Q99440 93 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 FOXA2Q9Y261 457 aaPredicted RBP7.88□□□□□ -1.15
VPS13A-203ENST00000360280 IGHV1-69-2A0A0G2JMI3 117 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 LOC105371267A0A1B0GV96 52 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 FABP5P3A8MUU1 101 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 LINC01565O15544 149 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 ZNHIT1O43257 154 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 COL9A1P20849 921 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 TMEM167AQ8TBQ9 72 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 GPHA2Q96T91 129 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 LY6EQ16553 131 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 RTN4RL2Q86UN3 420 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 LCTP09848 1927 aa7.88□□□□□ -1.15
VPS13A-203ENST00000360280 TMEM54Q969K7 222 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.87□□□□□ -1.15
VPS13A-203ENST00000360280 TRBV5-7A0A0A0MS05 114 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 RBMY1FQ15415 496 aaKnown RBP7.87□□□□□ -1.15
VPS13A-203ENST00000360280 SIRT4Q9Y6E7 314 aaPredicted RBP7.87□□□□□ -1.15
VPS13A-203ENST00000360280 INAFM2P0DMQ5 153 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 CCL20P78556 96 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 SLC25A38Q96DW6 304 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 IFI27L2Q9H2X8 130 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 IGHMP01871 453 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 COX5BP10606 129 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 PDLIM4P50479 330 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 EGR4Q05215 589 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 ZIC3O60481 467 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 MRAPQ8TCY5 172 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 KLF4O43474 513 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 RASL11AQ6T310 242 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 C21orf62Q9NYP8 219 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 SPINK8P0C7L1 97 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 ASPHD2Q6ICH7 369 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 OSTCQ9NRP0 149 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 SHANK3Q9BYB0 1731 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 LHFPL6Q9Y693 200 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 B9A039 149 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 RHOGP84095 191 aa7.87□□□□□ -1.15
VPS13A-203ENST00000360280 SPTA1P02549 2419 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 STHQ8IWL8 128 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 ZNF826PQ6ZT77 177 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 GTSCR1Q86UQ5 136 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 HIST1H2BLQ99880 126 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 PRTN3P24158 256 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 ZNF415Q09FC8 603 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 OR5P3Q8WZ94 311 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 IFI27L1Q96BM0 104 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 IFITM2Q01629 132 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 GAGE2AQ6NT46 116 aa7.86□□□□□ -1.15
VPS13A-203ENST00000360280 LEAP2Q969E1 77 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms