RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 OR8B2Q96RD0 313 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 MEGF9Q9H1U4 602 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 LAMTOR5O43504 91 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 RPL15P61313 204 aaKnown RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 LGALS9BQ3B8N2 356 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 LGALS9CQ6DKI2 356 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 DNAH12Q6ZR08 3092 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 PTCRAQ6ISU1 281 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ASCL2Q99929 193 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 R4GN57 208 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 PVRIGQ6DKI7 326 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 SPACA3Q8IXA5 215 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 NABP2Q9BQ15 211 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 IGHV1-45A0A0A0MS14 117 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 RPL30P62888 115 aaKnown RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 DLX4Q92988 240 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ABHD14AQ9BUJ0 271 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 MRPL16Q9NX20 251 aaKnown RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 KLF12Q9Y4X4 402 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 BVES-AS1Q5T3Y7 98 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 RSPO3Q9BXY4 272 aaPredicted RBP3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF492Q9P255 531 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 PGPEP1LA6NFU8 196 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 INS-IGF2F8WCM5 200 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 MYF5P13349 255 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 ARL16Q0P5N6 197 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 TEX45Q8NA69 505 aa3.45□□□□□ -1.86
SYNE2-204ENST00000358025 CLEC12BQ2HXU8 276 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 PILRBQ9UKJ0 227 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 PRR33A8MZF0 331 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 MFAP4P55083 255 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM8BA6NDV4 472 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 FER1L6-AS1Q8NA97 138 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 THOC3Q96J01 351 aaKnown RBP3.44□□□□□ -1.86
SYNE2-204ENST00000358025 HIST1H4GQ99525 98 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 CHCHD2Q9Y6H1 151 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-204ENST00000358025 WIPF3A6NGB9 483 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 H0YJW9 148 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 Q6ZWC4 215 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 GAGE13Q4V321 117 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 PHF7Q9BWX1 381 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-204ENST00000358025 RTN4RQ9BZR6 473 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 CXCL13O43927 109 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 OR1K1Q8NGR3 316 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 RASL11BQ9BPW5 248 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 PIMREGQ9BSJ6 248 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 NPFFR1Q9GZQ6 430 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 HIVEP3Q5T1R4 2406 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 PGPA6NDG6 321 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 SELLP14151 372 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 ADMP35318 185 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 LYG1Q8N1E2 194 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM126AQ9H061 195 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 HCSTQ9UBK5 93 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TNS1Q9HBL0 1735 aaKnown RBP3.44□□□□□ -1.86
SYNE2-204ENST00000358025 CNIH1O95406 144 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 GFERP55789 205 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 BHLHA15Q7RTS1 189 aaPredicted RBP3.44□□□□□ -1.86
SYNE2-204ENST00000358025 C8orf31Q8N9H6 132 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 HAX1O00165 279 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 RLN3Q8WXF3 142 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM14CQ9P0S9 112 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 C15orf62A8K5M9 175 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 CD69Q07108 199 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TGIF1Q15583 401 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 NUP35Q8NFH5 326 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 PIFOQ8TCI5 191 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 FAM222BQ8WU58 562 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 KRTCAP3Q53RY4 240 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 A0A0G2JLM5 398 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM189A5PLL7 270 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 SSMEM1Q8WWF3 244 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 H1FXQ92522 213 aaKnown RBP3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TRAV34A0A0B4J273 112 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 SCO2A0A1W2PP80 73 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 ZNF83P51522 516 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 ZIC4Q8N9L1 334 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM52Q8NDY8 209 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 NABP1Q96AH0 204 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 C4orf51C9J302 202 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 HBDP02042 147 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 SPATA46Q5T0L3 261 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 LCNL1Q6ZST4 164 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 HIGD1BQ9P298 99 aa3.44□□□□□ -1.86
SYNE2-204ENST00000358025 G3V4G9 280 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 GAGE2BQ13066 116 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 GAGE2EQ4V326 116 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 MBNL2Q5VZF2 373 aaKnown RBP3.43□□□□□ -1.86
SYNE2-204ENST00000358025 GAGE2DQ9UEU5 116 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 TRBV6-1A0A0K0K1D8 114 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 COQ2Q96H96 371 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 TMEM140Q9NV12 185 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 CALYQ9NYX4 217 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 IDI2-AS1Q9NZ38 188 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 LINC00312Q9Y6C7 94 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 A8MWV9 139 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 CR1LQ2VPA4 569 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 SLC25A39Q9BZJ4 359 aaPredicted RBP3.43□□□□□ -1.86
SYNE2-204ENST00000358025 C15orf61A6NNL5 157 aa3.43□□□□□ -1.86
SYNE2-204ENST00000358025 PRKNO60260 465 aaPredicted RBP3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms