RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 RNF125Q96EQ8 232 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 TMEM178BH3BS89 294 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 PEX7O00628 323 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 ZNF362Q5T0B9 420 aaPredicted RBP12.86□□□□□ -0.35
PTPRO-202ENST00000348962 TRBV9A0A0B4J1U6 114 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 TRAV41A0A0B4J266 112 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 REC114Q7Z4M0 266 aa12.86□□□□□ -0.35
PTPRO-202ENST00000348962 CXorf65A6NEN9 183 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 H3BVH4 76 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 SRIP30626 198 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 PMCHL1Q16048 86 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 ERASQ7Z444 233 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 SFRP2Q96HF1 295 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 RARRES2Q99969 163 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 VENTXO95231 258 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 LBHQ53QV2 105 aaPredicted RBP12.85□□□□□ -0.35
PTPRO-202ENST00000348962 OR4D5Q8NGN0 318 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 IFT22Q9H7X7 185 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 FAM131CQ96AQ9 280 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 PATJQ8NI35 1801 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 TCTAP57738 103 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 ZP1P60852 638 aa12.85□□□□□ -0.35
PTPRO-202ENST00000348962 SRSF6Q13247 344 aaKnown RBP12.85□□□□□ -0.35
PTPRO-202ENST00000348962 ARID2Q68CP9 1835 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 USF3Q68DE3 2245 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 IGHV2-26A0A0B4J1V2 119 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 SP5Q6BEB4 398 aaPredicted RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 OR11H4Q8NGC9 324 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 RTBDNQ9BSG5 229 aaPredicted RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 ZNF319Q9P2F9 582 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 A0A0G2JMZ2 1700 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 LRRC37A2A6NM11 1700 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 GGCTO75223 188 aaKnown RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 RNASE4P34096 147 aaKnown RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 ALKBH7Q9BT30 221 aaPredicted RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 TRAV20A0A0B4J274 112 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 TRGC2P03986 189 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 PAX8Q06710 450 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 Q6AWC8 147 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 FMC1Q96HJ9 113 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 ZNF256Q9Y2P7 627 aaPredicted RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 TTC28Q96AY4 2481 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 A0A087X0M5 115 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 A0A1B0GX30 115 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 DUTP33316 252 aaKnown RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 LEPP41159 167 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 HINT1P49773 126 aaPredicted RBP12.84□□□□□ -0.35
PTPRO-202ENST00000348962 TFF3Q07654 80 aa12.84□□□□□ -0.35
PTPRO-202ENST00000348962 PSME4Q14997 1843 aa12.83□□□□□ -0.35
PTPRO-202ENST00000348962 ERVH48-1M5A8F1 160 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 MST1P26927 711 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 VMO1Q7Z5L0 202 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 FAM89BQ8N5H3 189 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 OR10S1Q8NGN2 331 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 MED12Q93074 2177 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 EGR1P18146 543 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 FHITP49789 147 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 MARVELD3Q96A59 401 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 ASCL2Q99929 193 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 IGKV1D-13A0A0B4J2D9 117 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 H7C2G1 150 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 IGHV1-8P0DP01 117 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 IGKV1-13P0DP09 117 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 PI4KAP42356 2102 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 LRTM2Q8N967 370 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 A0A1B0GUT8 65 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 TFF1P04155 84 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 SMIM6P0DI80 62 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 FOLR2P14207 255 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 Q9H3A6 140 aa12.83□□□□□ -0.36
PTPRO-202ENST00000348962 ANKRD36A6QL64 1941 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 WNK2Q9Y3S1 2297 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 GATA2P23769 480 aaPredicted RBP12.82□□□□□ -0.36
PTPRO-202ENST00000348962 PRCDQ00LT1 54 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 NABP1Q96AH0 204 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 RNF5Q99942 180 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 FABP5P3A8MUU1 101 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 H3BUX3 64 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 SRD5A1P18405 259 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 KIAA1644Q3SXP7 199 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 SCN5AQ14524 2016 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 NOTCH3Q9UM47 2321 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 TAS2R60P59551 318 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 C2orf88Q9BSF0 95 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 OTORQ9NRC9 128 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 LINC00527Q9UJ94 153 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 ZNF257Q9Y2Q1 563 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 BDP1A6H8Y1 2624 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 J3QKU1 62 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 M0R1W7 72 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 ZNF506Q5JVG8 444 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 TMEM136Q6ZRR5 245 aa12.82□□□□□ -0.36
PTPRO-202ENST00000348962 PUSL1Q8N0Z8 303 aaKnown RBP12.82□□□□□ -0.36
PTPRO-202ENST00000348962 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTPRO-202ENST00000348962 NDUFS8O00217 210 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 SAP30O75446 220 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 RALGAPA2Q2PPJ7 1873 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 CD5P06127 495 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 CD7P09564 240 aa12.81□□□□□ -0.36
PTPRO-202ENST00000348962 GLRX5Q86SX6 157 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms