RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 ETFRF1Q6IPR1 90 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 ARPC1AQ92747 370 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 PTPN13Q12923 2485 aa17.04■□□□□ 0.32
TSPAN3-202ENST00000346495 AGPAT2O15120 278 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 HLA-DRB1P01911 266 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 BPIFB3P59826 476 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 MLANAQ16655 118 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 ACOT6Q3I5F7 207 aaPredicted RBP17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 SPSB3Q6PJ21 355 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 OR10G4Q8NGN3 311 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 OR10G9Q8NGN4 311 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 OR10G7Q8NGN6 311 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 SFT2D1Q8WV19 159 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 MBD3L1Q8WWY6 194 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 MISP3Q96FF7 219 aa17.03■□□□□ 0.32
TSPAN3-202ENST00000346495 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.02■□□□□ 0.322e-6■■■□□ 15.9
TSPAN3-202ENST00000346495 TRAV1-1A0A0B4J248 108 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 CTRB1P17538 263 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 M6PRP20645 277 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 MFAP2P55001 183 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 CTRB2Q6GPI1 263 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 OR1L6Q8NGR2 347 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 RCC1LQ96I51 464 aaKnown RBP17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 RBM14Q96PK6 669 aaKnown RBP17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 SSX3Q99909 188 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 FNDC4Q9H6D8 234 aaPredicted RBP17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 PXMP4Q9Y6I8 212 aa17.02■□□□□ 0.31
TSPAN3-202ENST00000346495 KRBOX1C9JBD0 128 aa17.01■□□□□ 0.31
TSPAN3-202ENST00000346495 RPL29P47914 159 aaKnown RBP17.01■□□□□ 0.31
TSPAN3-202ENST00000346495 ZNF726P1Q15940 193 aa17.01■□□□□ 0.31
TSPAN3-202ENST00000346495 RPP25LQ8N5L8 163 aaKnown RBP17.01■□□□□ 0.31
TSPAN3-202ENST00000346495 PIFOQ8TCI5 191 aa17.01■□□□□ 0.31
TSPAN3-202ENST00000346495 FAM103A1Q9BTL3 118 aaKnown RBP17.01■□□□□ 0.31
TSPAN3-202ENST00000346495 IGHV7-81A0A0B4J1V7 117 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 CYB5BO43169 146 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 ZP3P21754 424 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 MIC13Q5XKP0 118 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 CYB5R2Q6BCY4 276 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 BPIFCQ8NFQ6 507 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 OR2T6Q8NHC8 308 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 ACY3Q96HD9 319 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 SLC25A33Q9BSK2 321 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 ACTR3CQ9C0K3 210 aaPredicted RBP17■□□□□ 0.31
TSPAN3-202ENST00000346495 WNT10AQ9GZT5 417 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 MOB4Q9Y3A3 225 aa17■□□□□ 0.31
TSPAN3-202ENST00000346495 A0A1B0GV50 99 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 NPIPB5A8MRT5 1133 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 CRYGCP07315 174 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 DEFA4P12838 97 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 NDPQ00604 133 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 C19orf35Q6ZS72 473 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 FAM210AQ96ND0 272 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 SLC39A9Q9NUM3 307 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 NAV3Q8IVL0 2385 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 CTXND1A0A1B0GTU2 59 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 B2MP61769 119 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 C5orf56Q8N8D9 126 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 C22orf15Q8WYQ4 148 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 PBDC1Q9BVG4 233 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 TREM1Q9NP99 234 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 SLC45A2Q9UMX9 530 aa16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 SOX21Q9Y651 276 aaPredicted RBP16.99■□□□□ 0.31
TSPAN3-202ENST00000346495 IGKV1OR2-108A0A075B7D4 117 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 YIF1AO95070 293 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 OR10J1P30954 320 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 SRSF3P84103 164 aaKnown RBP16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 PRR20EP86478 221 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 PRR20CP86479 221 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 PRR20DP86480 221 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 PRR20BP86481 221 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 PRR20AP86496 221 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 FAM122CQ6P4D5 195 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 LCN15Q6UWW0 184 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 TTC9CQ8N5M4 171 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 STPG3Q8N7X2 389 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 LINC00052Q96N35 136 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 POLQO75417 2590 aa16.98■□□□□ 0.31
TSPAN3-202ENST00000346495 MAP1LC3B2A6NCE7 125 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 CCL20P78556 96 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 PEA15Q15121 130 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 GUK1Q16774 197 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 ASPHD1Q5U4P2 390 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 SSX7Q7RTT5 188 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 THAP8Q8NA92 274 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 NPIPB3Q92617 1050 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 NARS2Q96I59 477 aaKnown RBP16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 FOXC2Q99958 501 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 MAP1LC3BQ9GZQ8 125 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 DMRT1Q9Y5R6 373 aa16.97■□□□□ 0.31
TSPAN3-202ENST00000346495 SEC14L6B5MCN3 397 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 H3BUX3 64 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 MT-CO2P00403 227 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 CD5P06127 495 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 CDC34P49427 236 aaPredicted RBP16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 TMEM219Q86XT9 240 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 WFDC11Q8NEX6 87 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 NANPQ8TBE9 248 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 HSPB9Q9BQS6 159 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 TMEM231Q9H6L2 316 aa16.96■□□□□ 0.31
TSPAN3-202ENST00000346495 SLC25A22Q9H936 323 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms