RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 NEUROG1Q92886 237 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 DEPPQ9NTK1 212 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 KBTBD11-OT1A0A1B0GTJ5 212 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 hDV102S1A0JD36 115 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 IZUMO1RA6ND01 250 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 APOMO95445 188 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 DLX1P56177 255 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 PSMG4Q5JS54 123 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 FAM89BQ8N5H3 189 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 OR4X2Q8NGF9 303 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 ZNF714Q96N38 554 aa13.01□□□□□ -0.33
SRPK1-201ENST00000346162 GEMIN7Q9H840 131 aaKnown RBP13.01□□□□□ -0.33
SRPK1-201ENST00000346162 LOC105371242A0A075B767 164 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 PPIAL4CA0A0B4J2A2 164 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 APOHP02749 345 aaPredicted RBP13□□□□□ -0.33
SRPK1-201ENST00000346162 PPIAL4GP0DN37 164 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 CHODLQ9H9P2 273 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 WNT9BO14905 357 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 Q6ZWC4 215 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 ZNF716A6NP11 495 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 C9orf172C9J069 976 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 M0R3E3 92 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 BMPERQ8N8U9 685 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 ATP6V0BQ99437 205 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 FBXL7Q9UJT9 491 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 NTN3O00634 580 aaPredicted RBP13□□□□□ -0.33
SRPK1-201ENST00000346162 APELAP0DMC3 54 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 SSTR5P35346 364 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 HSD52Q0P140 79 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 TBR1Q16650 682 aa13□□□□□ -0.33
SRPK1-201ENST00000346162 INTS1Q8N201 2190 aaKnown RBP12.99□□□□□ -0.33
SRPK1-201ENST00000346162 RAB9AP51151 201 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 NOTCH4Q99466 2003 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 FAM181BA6NEQ2 426 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 LILRA1O75019 489 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 LHX2P50458 406 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 CSRP2Q16527 193 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 KHDC1LQ5JSQ8 128 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 RPP25LQ8N5L8 163 aaKnown RBP12.99□□□□□ -0.33
SRPK1-201ENST00000346162 EAF1Q96JC9 268 aaPredicted RBP12.99□□□□□ -0.33
SRPK1-201ENST00000346162 VCX2Q9H322 139 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 PHF3Q92576 2039 aaKnown RBP12.99□□□□□ -0.33
SRPK1-201ENST00000346162 KIR2DL5BA0A0G2JN68 375 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 KIR2DL5BA0A0G2JPC4 375 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 CDX4O14627 284 aaPredicted RBP12.99□□□□□ -0.33
SRPK1-201ENST00000346162 PLAUP00749 431 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 GAGE13Q4V321 117 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 FAM166AQ6J272 317 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 KIR2DL5AQ8N109 375 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 GRAMD2BQ96HH9 432 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 K7EP13 123 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 ORM1P02763 201 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 ZIC4Q8N9L1 334 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 JPT1Q9UK76 154 aa12.99□□□□□ -0.33
SRPK1-201ENST00000346162 THADAQ6YHU6 1953 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 A0A0A6YYD4 124 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 CCL21O00585 134 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 C18orf15Q96N68 181 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 MS4A6AQ9H2W1 248 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 EP400Q96L91 3159 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 PLAURQ03405 335 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 ABHD12Q8N2K0 398 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 STPG3Q8N7X2 389 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 SNRNP40Q96DI7 357 aaKnown RBP12.98□□□□□ -0.33
SRPK1-201ENST00000346162 AGMATQ9BSE5 352 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 DOCK9Q9BZ29 2069 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 CECR9P0C854 216 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 KIR2DL2P43627 348 aaPredicted RBP12.98□□□□□ -0.33
SRPK1-201ENST00000346162 LEAP2Q969E1 77 aa12.98□□□□□ -0.33
SRPK1-201ENST00000346162 C12orf77C9JDV5 145 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 PSG7Q13046 419 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 FHL1Q13642 323 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 ZFAND6Q6FIF0 208 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 TMEM105Q8N8V8 129 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 ZNF479Q96JC4 524 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 NABP2Q9BQ15 211 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 CLEC7AQ9BXN2 247 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 ANAPC1Q9H1A4 1944 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 SFTA2Q6UW10 78 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 SRSF12Q8WXF0 261 aaKnown RBP12.97□□□□□ -0.33
SRPK1-201ENST00000346162 HSPE1P61604 102 aaKnown RBP12.97□□□□□ -0.33
SRPK1-201ENST00000346162 TTC28Q96AY4 2481 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 FAM231BA6NCW3 169 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 HIGD1CA8MV81 97 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 ZDHHC16Q969W1 377 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 RASL11BQ9BPW5 248 aa12.97□□□□□ -0.33
SRPK1-201ENST00000346162 DIDO1Q9BTC0 2240 aaKnown RBP12.97□□□□□ -0.33
SRPK1-201ENST00000346162 TRAV8-2A0A0B4J237 113 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 SPINK8P0C7L1 97 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 GAGE2BQ13066 116 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 GAGE2EQ4V326 116 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 ZNRF1Q8ND25 227 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 GAGE2DQ9UEU5 116 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 PKDREJQ9NTG1 2253 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 GFRA1P56159 465 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 HGFACQ04756 655 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 DOCK7Q96N67 2140 aa12.96□□□□□ -0.33
SRPK1-201ENST00000346162 OSTCQ9NRP0 149 aa12.96□□□□□ -0.34
SRPK1-201ENST00000346162 TMEM160Q9NX00 188 aa12.96□□□□□ -0.34
SRPK1-201ENST00000346162 IGHV3-72A0A0B4J1Y9 119 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms