RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-201ENST00000345512 RAB1CQ92928 201 aa12.87□□□□□ -0.35
PTPRU-201ENST00000345512 RBM14Q96PK6 669 aaKnown RBP12.87□□□□□ -0.35
PTPRU-201ENST00000345512 TEX50A0A1B0GTY4 177 aa12.87□□□□□ -0.35
PTPRU-201ENST00000345512 GFRA3O60609 400 aa12.87□□□□□ -0.35
PTPRU-201ENST00000345512 TFPI2P48307 235 aa12.87□□□□□ -0.35
PTPRU-201ENST00000345512 OR52E5Q8NH55 327 aa12.87□□□□□ -0.35
PTPRU-201ENST00000345512 HSPB8Q9UJY1 196 aa12.87□□□□□ -0.35
PTPRU-201ENST00000345512 ATP5IP56385 69 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-201ENST00000345512 TBR1Q16650 682 aa12.87□□□□□ -0.35
PTPRU-201ENST00000345512 ARSJQ5FYB0 599 aaPredicted RBP12.87□□□□□ -0.35
PTPRU-201ENST00000345512 ARHGAP21Q5T5U3 1957 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 OR8A1Q8NGG7 326 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 OSTCQ9NRP0 149 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 IFITM10A6NMD0 228 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 PEX7O00628 323 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 TNFSF13O75888 250 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 MC5RP33032 325 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 CA7P43166 264 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 TCTAP57738 103 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 UPK2O00526 184 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 GNG7O60262 68 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 ZNF883P0CG24 379 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 SAA1P0DJI8 122 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-201ENST00000345512 MYOD1P15172 320 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 OSR1Q8TAX0 266 aaPredicted RBP12.86□□□□□ -0.35
PTPRU-201ENST00000345512 PRR7Q8TB68 274 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 GNB1LQ9BYB4 327 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 RNF24Q9Y225 148 aa12.86□□□□□ -0.35
PTPRU-201ENST00000345512 FAM90A9PA6NNJ1 464 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 BTF3P20290 206 aaKnown RBP12.85□□□□□ -0.35
PTPRU-201ENST00000345512 C1orf185Q5T7R7 199 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 SRRM5B3KS81 715 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 FAM87AP0C7U9 286 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 PYYP10082 97 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 RELBQ01201 579 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 C5orf17Q8NAS9 161 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 SSBP4Q9BWG4 385 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-201ENST00000345512 MRPL20Q9BYC9 149 aaKnown RBP12.85□□□□□ -0.35
PTPRU-201ENST00000345512 INTS1Q8N201 2190 aaKnown RBP12.85□□□□□ -0.35
PTPRU-201ENST00000345512 LOC102724200A0A096LPH7 203 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-201ENST00000345512 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-201ENST00000345512 TIMM23BQ5SRD1 257 aa12.85□□□□□ -0.35
PTPRU-201ENST00000345512 ZNF71Q9NQZ8 489 aaPredicted RBP12.85□□□□□ -0.35
PTPRU-201ENST00000345512 IGHV1-18A0A0C4DH31 117 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 IZUMO1RA6ND01 250 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 SP9P0CG40 484 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 FAM90A1Q86YD7 464 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 OR8B3Q8NGG8 313 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 LOC389332A0A1B0GUA5 103 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 ZNF785A8K8V0 405 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 NBEAP1P0C6P0 100 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 MMDQ15546 238 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 GRAMD2BQ96HH9 432 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 HIGD1CA8MV81 97 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 FAM27E3Q08E93 113 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 OR10W1Q8NGF6 305 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 ST6GALNAC6Q969X2 333 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 NEU1Q99519 415 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 SCRT1Q9BWW7 348 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 LAMTOR2Q9Y2Q5 125 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 HBBP68871 147 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 BPIFA4PQ86YQ2 179 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 ZNF114Q8NC26 417 aa12.84□□□□□ -0.35
PTPRU-201ENST00000345512 TRAV5A0A0B4J249 113 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 A0A1W2PRE2 83 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 ERVK11-1P61568 191 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 CACNG8Q8WXS5 425 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 TMEM70Q9BUB7 260 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 CCL3L1P16619 93 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 PCP4P48539 62 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 ASCL5Q7RTU5 278 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 POLR3KQ9Y2Y1 108 aaPredicted RBP12.83□□□□□ -0.36
PTPRU-201ENST00000345512 TMEM131Q92545 1883 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 PRCDQ00LT1 54 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 RNFT1Q5M7Z0 435 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 SLC25A34Q6PIV7 304 aa12.83□□□□□ -0.36
PTPRU-201ENST00000345512 C9JCJ5 164 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 CORTO00230 105 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 FTH1P19P0C7X4 201 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 GNG5P63218 68 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 Q6ZPA2 131 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 SNHG12Q9BXW3 62 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 KIR2DL2P43627 348 aaPredicted RBP12.82□□□□□ -0.36
PTPRU-201ENST00000345512 CD69Q07108 199 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 GOLT1AQ6ZVE7 132 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 SRSF12Q8WXF0 261 aaKnown RBP12.82□□□□□ -0.36
PTPRU-201ENST00000345512 TYMSP04818 313 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 RPL11P62913 178 aaKnown RBP12.82□□□□□ -0.36
PTPRU-201ENST00000345512 TMEM186Q96B77 213 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 ST6GALNAC3Q8NDV1 305 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 MDS2Q8NDY4 140 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 CHODLQ9H9P2 273 aa12.82□□□□□ -0.36
PTPRU-201ENST00000345512 EML5Q05BV3 1969 aa12.81□□□□□ -0.36
PTPRU-201ENST00000345512 COTL1Q14019 142 aa12.81□□□□□ -0.36
PTPRU-201ENST00000345512 TMEM30BQ3MIR4 351 aa12.81□□□□□ -0.36
PTPRU-201ENST00000345512 SCNM1Q9BWG6 230 aa12.81□□□□□ -0.36
PTPRU-201ENST00000345512 C11orf1Q9H5F2 150 aa12.81□□□□□ -0.36
PTPRU-201ENST00000345512 IGKV1D-17A0A075B6S4 117 aa12.81□□□□□ -0.36
PTPRU-201ENST00000345512 AREGP15514 252 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 183.2 ms