RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 C11orf52Q96A22 123 aa17.33■□□□□ 0.36
CCDC38-201ENST00000344280 SLC17A3O00476 420 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 DLX6P56179 175 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 PRB3Q04118 309 aaPredicted RBP17.32■□□□□ 0.36
CCDC38-201ENST00000344280 MORN5Q5VZ52 161 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 PFDN5Q99471 154 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 DYNLRB1Q9NP97 96 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 TPSG1Q9NRR2 321 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 MT-CO2P00403 227 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 IGLV2-23P01705 113 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 OR4C13Q8NGP0 309 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 ACY3Q96HD9 319 aa17.32■□□□□ 0.36
CCDC38-201ENST00000344280 OR7C2O60412 319 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 PDLIM4P50479 330 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 OR10G8Q8NGN5 311 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 IMMP2LQ96T52 175 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 LRBAP50851 2863 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 A0A1B0GUS0 222 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 CRYBB3P26998 211 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 OR5I1Q13606 314 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 C11orf42Q8N5U0 333 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 FNDC4Q9H6D8 234 aaPredicted RBP17.31■□□□□ 0.36
CCDC38-201ENST00000344280 ZNF430Q9H8G1 570 aaPredicted RBP17.31■□□□□ 0.36
CCDC38-201ENST00000344280 TRAPPC1Q9Y5R8 145 aa17.31■□□□□ 0.36
CCDC38-201ENST00000344280 DCHS2Q6V1P9 2916 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 OR5G3P0C626 314 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 EAF1Q96JC9 268 aaPredicted RBP17.3■□□□□ 0.36
CCDC38-201ENST00000344280 SLC35E1Q96K37 410 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 IGHV3-72A0A0B4J1Y9 119 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 TRAV5A0A0B4J249 113 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 PLAUP00749 431 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 FAM87AP0C7U9 286 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 AREGP15514 252 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 USF1P22415 310 aaPredicted RBP17.3■□□□□ 0.36
CCDC38-201ENST00000344280 ERHP84090 104 aaKnown RBP17.3■□□□□ 0.36
CCDC38-201ENST00000344280 TMEM167AQ8TBQ9 72 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 ZNF596Q8TC21 504 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 UHRF2Q96PU4 802 aa17.3■□□□□ 0.36
CCDC38-201ENST00000344280 TECRQ9NZ01 308 aaKnown RBP17.3■□□□□ 0.36
CCDC38-201ENST00000344280 GGTLC3B5MD39 225 aa17.29■□□□□ 0.36
CCDC38-201ENST00000344280 DLL1O00548 723 aa17.29■□□□□ 0.36
CCDC38-201ENST00000344280 TMEM155Q4W5P6 130 aa17.29■□□□□ 0.36
CCDC38-201ENST00000344280 PDPNQ86YL7 162 aa17.29■□□□□ 0.36
CCDC38-201ENST00000344280 LINC00311Q8N616 119 aa17.29■□□□□ 0.36
CCDC38-201ENST00000344280 TMEM186Q96B77 213 aa17.29■□□□□ 0.36
CCDC38-201ENST00000344280 MALRD1Q5VYJ5 2156 aa17.29■□□□□ 0.36
CCDC38-201ENST00000344280 LYNX1G3V0Z9 82 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 SLC25A17O43808 307 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 LYNX1P0DP58 116 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 CNN1P51911 297 aaKnown RBP17.28■□□□□ 0.36
CCDC38-201ENST00000344280 ATP5IP56385 69 aaPredicted RBP17.28■□□□□ 0.36
CCDC38-201ENST00000344280 SCNM1Q9BWG6 230 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 MRPL36Q9P0J6 103 aaKnown RBP17.28■□□□□ 0.36
CCDC38-201ENST00000344280 NBASA2RRP1 2371 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 ABCA4P78363 2273 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 PSMB11A5LHX3 300 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 C9JCJ5 164 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 REG1AP05451 166 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 IGHV1-8P0DP01 117 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 MRGPRG-AS1Q2M3A8 158 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 SLC25A33Q9BSK2 321 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 TMEM167BQ9NRX6 74 aa17.28■□□□□ 0.36
CCDC38-201ENST00000344280 FRMD6-AS1P0C7T7 363 aa17.27■□□□□ 0.36
CCDC38-201ENST00000344280 GZMBP10144 247 aa17.27■□□□□ 0.36
CCDC38-201ENST00000344280 RUSC1-AS1Q66K80 236 aa17.27■□□□□ 0.36
CCDC38-201ENST00000344280 TGIF2LXQ8IUE1 241 aa17.27■□□□□ 0.36
CCDC38-201ENST00000344280 KAAG1Q9UBP8 84 aa17.27■□□□□ 0.36
CCDC38-201ENST00000344280 WASHC3Q9Y3C0 194 aa17.27■□□□□ 0.36
CCDC38-201ENST00000344280 ZZEF1O43149 2961 aa17.27■□□□□ 0.36
CCDC38-201ENST00000344280 IGHV1-69-2A0A0G2JMI3 117 aa17.27■□□□□ 0.35
CCDC38-201ENST00000344280 VSTM5A8MXK1 200 aa17.27■□□□□ 0.35
CCDC38-201ENST00000344280 SSTP61278 116 aa17.27■□□□□ 0.35
CCDC38-201ENST00000344280 CENPWQ5EE01 88 aa17.27■□□□□ 0.35
CCDC38-201ENST00000344280 PQLC2Q6ZP29 291 aa17.27■□□□□ 0.35
CCDC38-201ENST00000344280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-201ENST00000344280 K7ENP7 123 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 ZNF90Q03938 601 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 RNASEH2CQ8TDP1 164 aaKnown RBP17.26■□□□□ 0.35
CCDC38-201ENST00000344280 CACNG8Q8WXS5 425 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 FAM167A-AS1Q96KT0 104 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 SLC25A2Q9BXI2 301 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 HELTA6NFD8 242 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 INS-IGF2F8WCM5 200 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 SUMO1P63165 101 aaKnown RBP17.26■□□□□ 0.35
CCDC38-201ENST00000344280 JOSD1Q15040 202 aaPredicted RBP17.26■□□□□ 0.35
CCDC38-201ENST00000344280 PNKDQ8N490 385 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 C8orf31Q8N9H6 132 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 LINC01560Q8TB33 94 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 NPIPB3Q92617 1050 aa17.26■□□□□ 0.35
CCDC38-201ENST00000344280 A0A087X0M5 115 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 A0A1B0GX30 115 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 GPX4P36969 197 aaPredicted RBP17.25■□□□□ 0.35
CCDC38-201ENST00000344280 ZNF137PP52743 207 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 FAM71F2Q6NXP2 309 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 C19orf35Q6ZS72 473 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 VSTM2AQ8TAG5 236 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 PRO1933Q9H354 126 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 NGBQ9NPG2 151 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 IL36BQ9NZH7 164 aa17.25■□□□□ 0.35
CCDC38-201ENST00000344280 IGF2RP11717 2491 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms