RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 RITA1Q96K30 269 aa12.07□□□□□ -0.48
VIPAS39-202ENST00000343765 NGBQ9NPG2 151 aa12.07□□□□□ -0.48
VIPAS39-202ENST00000343765 FAM90A27PA6NNH2 459 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 SLC25A17O43808 307 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 IGHV2-70P01814 119 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 ERHP84090 104 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 ACTL10Q5JWF8 245 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 TMEM183AQ8IXX5 376 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 OR1P1Q8NH06 330 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 TXNDC17Q9BRA2 123 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 MAP1AP78559 2803 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 SPTAN1Q13813 2472 aaKnown RBP12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 HRNRQ86YZ3 2850 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 IGHV1-69-2A0A0G2JMI3 117 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 K7EN84 100 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 K7ENP7 123 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 SLC17A3O00476 420 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 APELAP0DMC3 54 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 RBPJQ06330 500 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 CD69Q07108 199 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 HLA-DRB5Q30154 266 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 TMEM177Q53S58 311 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 TGIF2LXQ8IUE1 241 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 PFDN5Q99471 154 aa12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 ZNF430Q9H8G1 570 aaPredicted RBP12.06□□□□□ -0.48
VIPAS39-202ENST00000343765 ABCA1O95477 2261 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 TNFRSF13BO14836 293 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 WT1-ASQ06250 92 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 UHRF2Q96PU4 802 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 FNDC10F2Z333 226 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 DLL1O00548 723 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 USF1P22415 310 aaPredicted RBP12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 CRYBB3P26998 211 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 GRNP28799 593 aaKnown RBP12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 C9orf152Q5JTZ5 239 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 OR10G8Q8NGN5 311 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 ZNF503Q96F45 646 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 SLC35E1Q96K37 410 aa12.05□□□□□ -0.48
VIPAS39-202ENST00000343765 CD99P14209 185 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 OR5I1Q13606 314 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 MORN5Q5VZ52 161 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 TMEM186Q96B77 213 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 TECRQ9NZ01 308 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 WASHC3Q9Y3C0 194 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 TRAV5A0A0B4J249 113 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 CGB1A6NKQ9 187 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 CD3EP07766 207 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 SNRPCP09234 159 aaKnown RBP12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 IGHV1-8P0DP01 117 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 TMEM155Q4W5P6 130 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 PDPNQ86YL7 162 aa12.04□□□□□ -0.48
VIPAS39-202ENST00000343765 AMBPP02760 352 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 DLX6P56179 175 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 TMEM167AQ8TBQ9 72 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 ST6GALNAC6Q969X2 333 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 FNDC4Q9H6D8 234 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 TRAPPC1Q9Y5R8 145 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 IGLV2-23P01705 113 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 TYMSP04818 313 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 APOBEC3AP31941 199 aaPredicted RBP12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 MALRD1Q5VYJ5 2156 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 C19orf35Q6ZS72 473 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 NPIPB3Q92617 1050 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 SSUH2Q9Y2M2 353 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 DMRT1Q9Y5R6 373 aa12.03□□□□□ -0.48
VIPAS39-202ENST00000343765 A0A1B0GUS0 222 aa12.02□□□□□ -0.48
VIPAS39-202ENST00000343765 LCN2P80188 198 aa12.02□□□□□ -0.48
VIPAS39-202ENST00000343765 VSTM2AQ8TAG5 236 aa12.02□□□□□ -0.48
VIPAS39-202ENST00000343765 TMEM167BQ9NRX6 74 aa12.02□□□□□ -0.48
VIPAS39-202ENST00000343765 ANKHD1Q8IWZ3 2542 aaKnown RBP12.02□□□□□ -0.48
VIPAS39-202ENST00000343765 A0A1W2PN81 502 aa12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 GGTLC3B5MD39 225 aa12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 ZNF90Q03938 601 aa12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 CENPWQ5EE01 88 aa12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 HCP5Q6MZN7 132 aa12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 EAF1Q96JC9 268 aaPredicted RBP12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 VKORC1Q9BQB6 163 aa12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 ARHGAP32A7KAX9 2087 aa12.02□□□□□ -0.49
VIPAS39-202ENST00000343765 OR5G3P0C626 314 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 CNTFRP26992 372 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 SUMO1P63165 101 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 PQLC2Q6ZP29 291 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 C11orf52Q96A22 123 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 TMEM133Q9H2Q1 129 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 MRPL36Q9P0J6 103 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 ZFHX3Q15911 3703 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 AREGP15514 252 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 GNG4P50150 75 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 LGALS4P56470 323 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 TAS2R45P59539 299 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 ERVFC1-1P60608 527 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 RPL15P61313 204 aaKnown RBP12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 FOXL1Q12952 345 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 VMA21Q3ZAQ7 101 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 LINC00311Q8N616 119 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 VPS13CQ709C8 3753 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 IGHV3-21A0A0B4J1V1 117 aa12.01□□□□□ -0.49
VIPAS39-202ENST00000343765 A0A1W2PPI3 338 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms