RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 TRAV9-1A0A075B6T8 112 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 MUC21A0A0G2JKD1 596 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 MUC21A0A140T8X8 626 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 FAM90A8PA6NJQ4 464 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 S1PR2O95136 353 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 NRASP01111 189 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 KRASP01116 189 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 GYPAP02724 150 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 H2BFMP0C1H6 154 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 FAM90A13PP0C7W8 464 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 FAM90A24PP0C7X0 464 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 ALOX5APP20292 161 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 GUCA1AP43080 201 aaPredicted RBP5.96□□□□□ -1.46
ZNF540-202ENST00000343599 FMODQ06828 376 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 LTC4SQ16873 150 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 MUC21Q5SSG8 566 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 MRPL54Q6P161 138 aaKnown RBP5.96□□□□□ -1.46
ZNF540-202ENST00000343599 BAGE3Q86Y29 109 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 BAGE2Q86Y30 109 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 KCNS1Q96KK3 526 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 SMR3AQ99954 134 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 PEMTQ9UBM1 199 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 HHLA2Q9UM44 414 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 WASHC3Q9Y3C0 194 aa5.96□□□□□ -1.46
ZNF540-202ENST00000343599 PSMB11A5LHX3 300 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 CEBPZOSA8MTT3 80 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 DHHO43323 396 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF728P0DKX0 622 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 TAS2R46P59540 309 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF718Q3SXZ3 478 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 FOXI2Q6ZQN5 318 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 LGI3Q8N145 548 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 OR4C3Q8NH37 302 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 OR2AE1Q8NHA4 323 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 PLPPR1Q8TBJ4 325 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 Q96M66 194 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 CHRDL1Q9BU40 450 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 SS18L2Q9UHA2 77 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 CACNA1DQ01668 2161 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 A0A0B4J2E0 115 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 A0A1B0GX12 115 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 SLC33A1O00400 549 aaPredicted RBP5.95□□□□□ -1.46
ZNF540-202ENST00000343599 HLA-DRB1P01911 266 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 IGLL1P15814 213 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 OMGP23515 440 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 MEF2BQ02080 365 aaPredicted RBP5.95□□□□□ -1.46
ZNF540-202ENST00000343599 TMEM187Q14656 261 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF726P1Q15940 193 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 OR10J3Q5JRS4 329 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 SLC25A47Q6Q0C1 308 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF525Q8N782 197 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 DEFB108BQ8NET1 73 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 SPSB4Q96A44 273 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 TPPP3Q9BW30 176 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.95□□□□□ -1.46
ZNF540-202ENST00000343599 A0A1B0GW15 77 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 F2Z2F3 143 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 PDE6DO43924 150 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 NUDT3O95989 172 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 ASAH2BP0C7U1 165 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF74Q16587 644 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 KIAA1644Q3SXP7 199 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 TCF23Q7RTU1 214 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 C8orf31Q8N9H6 132 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 OR5A1Q8NGJ0 315 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 FAM103A1Q9BTL3 118 aaKnown RBP5.95□□□□□ -1.46
ZNF540-202ENST00000343599 HINT2Q9BX68 163 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 RTN4RQ9BZR6 473 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 BANF2Q9H503 90 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 WDR76Q9H967 626 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 ST20Q9HBF5 79 aa5.95□□□□□ -1.46
ZNF540-202ENST00000343599 MRPL16Q9NX20 251 aaKnown RBP5.95□□□□□ -1.46
ZNF540-202ENST00000343599 A0A1W2PS18 150 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF785A8K8V0 405 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 H3BSH0 61 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 HAX1O00165 279 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 CA2P00918 260 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 GPM6AP51674 278 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 PIGPP57054 158 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 ODF3L1Q8IXM7 274 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 DOK4Q8TEW6 326 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 OR5P3Q8WZ94 311 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 SLC25A44Q96H78 314 aaPredicted RBP5.94□□□□□ -1.46
ZNF540-202ENST00000343599 ABHD14BQ96IU4 210 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 FAM234AQ9H0X4 552 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 TMEM14AQ9Y6G1 99 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 FAM231BA6NCW3 169 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 FAM24AA6NFZ4 105 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 TMEM14DPA8MWL7 114 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF737O75373 536 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 ZNF324O75467 553 aaPredicted RBP5.94□□□□□ -1.46
ZNF540-202ENST00000343599 LOXL3P58215 753 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 TNP2Q05952 138 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 TSPO2Q5TGU0 170 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 TMEM252Q8N6L7 170 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 OR5C1Q8NGR4 320 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 BPESC1Q9GZL8 116 aa5.94□□□□□ -1.46
ZNF540-202ENST00000343599 MRPL18Q9H0U6 180 aaKnown RBP5.94□□□□□ -1.46
ZNF540-202ENST00000343599 C7orf71A4D174 169 aa5.93□□□□□ -1.46
ZNF540-202ENST00000343599 C9orf118A6NHY6 69 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms