RNA–Protein interactions for RNA: ENST00000342409.3

FRMD4A-202, Transcript of FERM domain containing 4A, humanhuman

TSL 2

Gene FRMD4A, Length 1,741 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD4A-202ENST00000342409 PRSS57Q6UWY2 283 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 SSMEM1Q8WWF3 244 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 RCC1LQ96I51 464 aaKnown RBP13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 Q96MF0 132 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 MEGF9Q9H1U4 602 aa13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 MRPL36Q9P0J6 103 aaKnown RBP13.61□□□□□ -0.23
FRMD4A-202ENST00000342409 FASNP49327 2511 aaKnown RBP13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 A0A1B0GV50 99 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 YIF1AO95070 293 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 TSPAN15O95858 294 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 FAM106CPP0CH98 169 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 FXYD3Q14802 87 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 FFAR4Q5NUL3 377 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 SLC16A13Q7RTY0 426 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 RPP25LQ8N5L8 163 aaKnown RBP13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 BPIFCQ8NFQ6 507 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 OR2T6Q8NHC8 308 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 RNASEH2CQ8TDP1 164 aaKnown RBP13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 FAM96BQ9Y3D0 163 aa13.6□□□□□ -0.23
FRMD4A-202ENST00000342409 NCBP2LA6PVI3 153 aaKnown RBP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 EIF3GO75821 320 aaKnown RBP eCLIP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 CNIH1O95406 144 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 H2AFB1P0C5Y9 115 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 GPX4P36969 197 aaPredicted RBP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 CX3CL1P78423 397 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 AKR1C1Q04828 323 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 TMEM249Q2WGJ8 235 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 ASPHD1Q5U4P2 390 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 TMEM144Q7Z5S9 345 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 SRSF8Q9BRL6 282 aaKnown RBP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 FAM103A1Q9BTL3 118 aaKnown RBP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 AKAP9Q99996 3911 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 EGR2P11161 476 aaPredicted RBP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 OPRK1P41145 380 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 SUB1P53999 127 aaKnown RBP eCLIP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 GCSAMLQ5JQS6 135 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 MIC13Q5XKP0 118 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 TEPPQ6URK8 271 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 ZNF562Q6V9R5 426 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 MBD3L1Q8WWY6 194 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 CACNG8Q8WXS5 425 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 TMEM231Q9H6L2 316 aa13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 F11RQ9Y624 299 aaKnown RBP13.59□□□□□ -0.23
FRMD4A-202ENST00000342409 MXRA5Q9NR99 2828 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 IGHV7-81A0A0B4J1V7 117 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 C9JQL5 133 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 C17orf112F2Z3M2 114 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 TGFAP01135 160 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 IGHV3-48P01763 117 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 CRYGCP07315 174 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 DEFA4P12838 97 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 UQCC3Q6UW78 93 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 ZNF709Q8N972 641 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 OR1P1Q8NH06 330 aa13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 FLNAP21333 2647 aaKnown RBP13.58□□□□□ -0.24
FRMD4A-202ENST00000342409 TRAV1-1A0A0B4J248 108 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 CD5P06127 495 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 LINC00869P0C866 280 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 CTRB1P17538 263 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 CTRB2Q6GPI1 263 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 MRPL41Q8IXM3 137 aaKnown RBP13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 SFT2D1Q8WV19 159 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 HSPB9Q9BQS6 159 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 HECTD1Q9ULT8 2610 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 SLC45A2Q9UMX9 530 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 PXMP4Q9Y6I8 212 aa13.57□□□□□ -0.24
FRMD4A-202ENST00000342409 J3QLI3 93 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 HLA-DRB1P01911 266 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 ZP3P21754 424 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 PRR20EP86478 221 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 PRR20CP86479 221 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 PRR20DP86480 221 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 PRR20BP86481 221 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 PRR20AP86496 221 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 COMMD1Q8N668 190 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 ARPC1AQ92747 370 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 FAM210AQ96ND0 272 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 C1RLQ9NZP8 487 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 IGKV1D-37A0A075B6S9 117 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 FSHBP01225 129 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 M6PRP20645 277 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 LCN15Q6UWW0 184 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 TMEM219Q86XT9 240 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 WFDC11Q8NEX6 87 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 OR10G4Q8NGN3 311 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 OR10G9Q8NGN4 311 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 OR10G7Q8NGN6 311 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 ABHD5Q8WTS1 349 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 MISP3Q96FF7 219 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 WNT10AQ9GZT5 417 aa13.56□□□□□ -0.24
FRMD4A-202ENST00000342409 MBP02144 154 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 AMY1AP04745 511 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 ADCYAP1P18509 176 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 OR10J1P30954 320 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 RPL29P47914 159 aaKnown RBP13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 STPG3Q8N7X2 389 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 C5orf56Q8N8D9 126 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 ACY3Q96HD9 319 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 SLC35E1Q96K37 410 aa13.55□□□□□ -0.24
FRMD4A-202ENST00000342409 SLC25A33Q9BSK2 321 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms