RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 LOC102723996A0A087X1L8 192 aa12.72□□□□□ -0.37
COL11A2-201ENST00000341947 ZNF688P0C7X2 276 aa12.72□□□□□ -0.37
COL11A2-201ENST00000341947 NAT1P18440 290 aa12.72□□□□□ -0.37
COL11A2-201ENST00000341947 IGLV3-12A0A075B6K2 115 aa12.72□□□□□ -0.37
COL11A2-201ENST00000341947 IGHV1-18A0A0C4DH31 117 aa12.72□□□□□ -0.37
COL11A2-201ENST00000341947 MORN2Q502X0 79 aa12.72□□□□□ -0.37
COL11A2-201ENST00000341947 PSMG4Q5JS54 123 aa12.72□□□□□ -0.37
COL11A2-201ENST00000341947 LINC00114Q6XXX2 140 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 ZNF525Q8N782 197 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 IMMP2LQ96T52 175 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 ARFGEF1Q9Y6D6 1849 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 CD24P25063 80 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 GNG5P63218 68 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 ZFC3H1O60293 1989 aaKnown RBP12.71□□□□□ -0.37
COL11A2-201ENST00000341947 LINC00271P0C7V0 271 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 C3orf36Q3SXR2 165 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 SPRR3Q9UBC9 169 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
COL11A2-201ENST00000341947 LYNX1G3V0Z9 82 aa12.71□□□□□ -0.38
COL11A2-201ENST00000341947 OR9G9P0C7N8 305 aa12.71□□□□□ -0.38
COL11A2-201ENST00000341947 LYNX1P0DP58 116 aa12.71□□□□□ -0.38
COL11A2-201ENST00000341947 EFNB1P98172 346 aa12.71□□□□□ -0.38
COL11A2-201ENST00000341947 ZNF324BQ6AW86 544 aaPredicted RBP12.71□□□□□ -0.38
COL11A2-201ENST00000341947 ZNF497Q6ZNH5 498 aa12.71□□□□□ -0.38
COL11A2-201ENST00000341947 NXT2Q9NPJ8 142 aaKnown RBP12.71□□□□□ -0.38
COL11A2-201ENST00000341947 VWCEQ96DN2 955 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 MPTX1A8MV57 137 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 RP1L1Q8IWN7 2480 aaPredicted RBP12.7□□□□□ -0.38
COL11A2-201ENST00000341947 CMC4P56277 68 aaPredicted RBP12.7□□□□□ -0.38
COL11A2-201ENST00000341947 ZNF585BQ52M93 769 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 FBLN7Q53RD9 439 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 HIGD1CA8MV81 97 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 APOMO95445 188 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 C11orf44Q8N8P7 122 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 A0A1B0GTI1 187 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 TIMM23O14925 209 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 SRP19P09132 144 aaKnown RBP12.7□□□□□ -0.38
COL11A2-201ENST00000341947 MTURNQ8N3F0 131 aa12.7□□□□□ -0.38
COL11A2-201ENST00000341947 ERVH48-1M5A8F1 160 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 PAX8Q06710 450 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 C18orf12Q96KH6 178 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 NINQ8N4C6 2090 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 SNAI2O43623 268 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 CTAG1AP78358 180 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 ZNF415Q09FC8 603 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 OR9G4Q8NGQ1 327 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 DMRT1Q9Y5R6 373 aa12.69□□□□□ -0.38
COL11A2-201ENST00000341947 IGFBP3P17936 291 aaPredicted RBP12.68□□□□□ -0.38
COL11A2-201ENST00000341947 CFHR1Q03591 330 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 TNFRSF14Q92956 283 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 DEPPQ9NTK1 212 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 A0A1B0GWB2 263 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 OVOL1O14753 267 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 ZCCHC24Q8N2G6 241 aaKnown RBP12.68□□□□□ -0.38
COL11A2-201ENST00000341947 SAP30O75446 220 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 SRSF1Q07955 248 aaKnown RBP eCLIP12.68□□□□□ -0.38
COL11A2-201ENST00000341947 ZNF257Q9Y2Q1 563 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 TRAV41A0A0B4J266 112 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 CSRP3P50461 194 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 SIGLEC15Q6ZMC9 328 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 C14orf144Q96I85 54 aa12.68□□□□□ -0.38
COL11A2-201ENST00000341947 POLR2AP24928 1970 aaKnown RBP12.68□□□□□ -0.38
COL11A2-201ENST00000341947 C19orf67A6NJJ6 358 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 LDLRAD4O15165 306 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 IGHV1-46P01743 117 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 CD28P10747 220 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 ZFP36L1Q07352 338 aaKnown RBP12.67□□□□□ -0.38
COL11A2-201ENST00000341947 EPDR1Q9UM22 224 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 PHLDA1Q8WV24 401 aaPredicted RBP12.67□□□□□ -0.38
COL11A2-201ENST00000341947 SLC25A28Q96A46 364 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 IGLV3-32A0A0A0MS00 114 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 ADARB2-AS1A8MUL3 147 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 TFF1P04155 84 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 ST6GALNAC6Q969X2 333 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 CHCHD5Q9BSY4 110 aa12.67□□□□□ -0.38
COL11A2-201ENST00000341947 PRCDQ00LT1 54 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 LYZL4Q96KX0 146 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 CYSLTR1Q9Y271 337 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 PSG8Q9UQ74 426 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 EFNA4P52798 201 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 VMO1Q7Z5L0 202 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 SEPSECSQ9HD40 501 aaKnown RBP12.66□□□□□ -0.38
COL11A2-201ENST00000341947 RBBP6Q7Z6E9 1792 aaKnown RBP12.66□□□□□ -0.38
COL11A2-201ENST00000341947 COL11A1P12107 1806 aaPredicted RBP12.66□□□□□ -0.38
COL11A2-201ENST00000341947 PINLYPA6NC86 204 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 PRADC1Q9BSG0 188 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 CCL20P78556 96 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 LAIR2Q6ISS4 152 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 OR5A1Q8NGJ0 315 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 MAP1BP46821 2468 aaKnown RBP12.66□□□□□ -0.38
COL11A2-201ENST00000341947 UNC13CQ8NB66 2214 aa12.66□□□□□ -0.38
COL11A2-201ENST00000341947 IGKV1D-13A0A0B4J2D9 117 aa12.65□□□□□ -0.38
COL11A2-201ENST00000341947 RAMP3O60896 148 aa12.65□□□□□ -0.38
COL11A2-201ENST00000341947 IGKV1-13P0DP09 117 aa12.65□□□□□ -0.38
COL11A2-201ENST00000341947 SHISA3A0PJX4 238 aa12.65□□□□□ -0.38
COL11A2-201ENST00000341947 FAM90A9PA6NNJ1 464 aa12.65□□□□□ -0.38
COL11A2-201ENST00000341947 SRD5A1P18405 259 aa12.65□□□□□ -0.38
COL11A2-201ENST00000341947 TMEM95Q3KNT9 176 aa12.65□□□□□ -0.38
COL11A2-201ENST00000341947 RNASE7Q9H1E1 156 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms