RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 IZUMO1RA6ND01 250 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 AHRRA9YTQ3 701 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 PPIAL4DF5H284 164 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 CRXO43186 299 aaPredicted RBP12.64□□□□□ -0.39
LIMK2-203ENST00000340552 SMPD2O60906 423 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 RBMXL2O75526 392 aaKnown RBP12.64□□□□□ -0.39
LIMK2-203ENST00000340552 KLF5Q13887 457 aaPredicted RBP12.64□□□□□ -0.39
LIMK2-203ENST00000340552 DEFB109BQ30KR1 87 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 PDLIM3Q53GG5 364 aaPredicted RBP12.64□□□□□ -0.39
LIMK2-203ENST00000340552 SLC35E4Q6ICL7 350 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 MKXQ8IYA7 352 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 SMPXQ9UHP9 88 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 FAM168AQ92567 244 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 OR51B2Q9Y5P1 312 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 CFAP47Q6ZTR5 3102 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 SYS1-DBNDD2H3BUS1 97 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 ISLRO14498 428 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 CDIPTO14735 213 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 HLA-DRB1P01911 266 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 MGST1P10620 155 aaKnown RBP12.64□□□□□ -0.39
LIMK2-203ENST00000340552 NRN1LQ496H8 165 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 IBA57Q5T440 356 aaKnown RBP12.64□□□□□ -0.39
LIMK2-203ENST00000340552 IGFL2Q6UWQ7 119 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 GTF2H5Q6ZYL4 71 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 SSMEM1Q8WWF3 244 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 C5orf30Q96GV9 206 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 SAP30LQ9HAJ7 183 aa12.64□□□□□ -0.39
LIMK2-203ENST00000340552 HCFC1P51610 2035 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 HAND1O96004 215 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 IGLV2-8P01709 118 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 FOXG1P55316 489 aaPredicted RBP12.63□□□□□ -0.39
LIMK2-203ENST00000340552 BRWD1-AS2P59051 145 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 PPIAL4EA0A075B759 164 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 PPIAL4CA0A0B4J2A2 164 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 PPIAL4FP0DN26 164 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 GPR183P32249 361 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 PRR31Q5SQ13 230 aa12.63□□□□□ -0.39
LIMK2-203ENST00000340552 NAA38Q9BRA0 125 aaKnown RBP12.63□□□□□ -0.39
LIMK2-203ENST00000340552 SSBP3Q9BWW4 388 aaPredicted RBP12.63□□□□□ -0.39
LIMK2-203ENST00000340552 TET2Q6N021 2002 aaPredicted RBP12.62□□□□□ -0.39
LIMK2-203ENST00000340552 TNRC6AQ8NDV7 1962 aaKnown RBP12.62□□□□□ -0.39
LIMK2-203ENST00000340552 A0A096LPE4 126 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 A0A1W2PPZ6 126 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 CA6P23280 308 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 TIGITQ495A1 244 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 MCRIP2Q9BUT9 160 aaKnown RBP12.62□□□□□ -0.39
LIMK2-203ENST00000340552 SSBP4Q9BWG4 385 aaPredicted RBP12.62□□□□□ -0.39
LIMK2-203ENST00000340552 MS4A5Q9H3V2 200 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 C1RLQ9NZP8 487 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 MPDU1O75352 247 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 AZU1P20160 251 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 EFNB3Q15768 340 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 C2orf91Q6ZV80 131 aa12.62□□□□□ -0.39
LIMK2-203ENST00000340552 ZNF808Q8N4W9 903 aaPredicted RBP12.62□□□□□ -0.39
LIMK2-203ENST00000340552 COL25A1Q9BXS0 654 aaPredicted RBP12.62□□□□□ -0.39
LIMK2-203ENST00000340552 PRRC2CQ9Y520 2896 aaKnown RBP12.61□□□□□ -0.39
LIMK2-203ENST00000340552 AREGP15514 252 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 REG1BP48304 166 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 WIPF2Q8TF74 440 aaPredicted RBP12.61□□□□□ -0.39
LIMK2-203ENST00000340552 TRAV17A0A0B4J275 112 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 K7EP34 96 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 UQCRFS1P47985 274 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 MFAP2P55001 183 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 CEACAM21Q3KPI0 293 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 FAM53AQ6NSI3 398 aaPredicted RBP12.61□□□□□ -0.39
LIMK2-203ENST00000340552 ASCL5Q7RTU5 278 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 GTSF1LQ9H1H1 148 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 C12orf49Q9H741 205 aa12.61□□□□□ -0.39
LIMK2-203ENST00000340552 PPOXP50336 477 aa12.6□□□□□ -0.39
LIMK2-203ENST00000340552 H2BFWTQ7Z2G1 175 aa12.6□□□□□ -0.39
LIMK2-203ENST00000340552 C1orf159Q96HA4 380 aa12.6□□□□□ -0.39
LIMK2-203ENST00000340552 CACNA1DQ01668 2161 aa12.6□□□□□ -0.39
LIMK2-203ENST00000340552 PET117Q6UWS5 81 aa12.6□□□□□ -0.39
LIMK2-203ENST00000340552 OR4A5Q8NH83 315 aa12.6□□□□□ -0.39
LIMK2-203ENST00000340552 C1QTNF5Q9BXJ0 243 aa12.6□□□□□ -0.39
LIMK2-203ENST00000340552 C9orf118A6NHY6 69 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 H3BUT2 72 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 SNAI2O43623 268 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 WISP2O76076 250 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 MT-CO2P00403 227 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 IGHG3P01860 377 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 SMAGPQ0VAQ4 97 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 NHLRC2Q8NBF2 726 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 OR52E5Q8NH55 327 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 TRAPPC2LQ9UL33 140 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 IGHV1-24A0A0C4DH33 117 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 HTR1DP28221 377 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 LINC00205P59089 165 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 ZNF645Q8N7E2 425 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 STPG3Q8N7X2 389 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 TMEM191AQ9H0A3 160 aa12.59□□□□□ -0.39
LIMK2-203ENST00000340552 A0A1B0GV72 72 aa12.58□□□□□ -0.39
LIMK2-203ENST00000340552 SCGB1A1P11684 91 aa12.58□□□□□ -0.39
LIMK2-203ENST00000340552 SEC11AP67812 179 aa12.58□□□□□ -0.39
LIMK2-203ENST00000340552 LINC00596Q86U02 117 aa12.58□□□□□ -0.39
LIMK2-203ENST00000340552 NPFFR1Q9GZQ6 430 aa12.58□□□□□ -0.39
LIMK2-203ENST00000340552 SPTBN2O15020 2390 aa12.58□□□□□ -0.4
LIMK2-203ENST00000340552 FRYQ5TBA9 3013 aa12.58□□□□□ -0.4
LIMK2-203ENST00000340552 ZNF503-AS2A6NEH8 195 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms