RNA–Protein interactions for RNA: ENST00000340157.8

VRK2-201, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 1,888 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-201ENST00000340157 TMEM41BQ5BJD5 291 aa16.81■□□□□ 0.28
VRK2-201ENST00000340157 RNASEH2CQ8TDP1 164 aaKnown RBP16.81■□□□□ 0.28
VRK2-201ENST00000340157 FAM103A1Q9BTL3 118 aaKnown RBP16.81■□□□□ 0.28
VRK2-201ENST00000340157 MEGF9Q9H1U4 602 aa16.81■□□□□ 0.28
VRK2-201ENST00000340157 NUDT19A8MXV4 375 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 TGFAP01135 160 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 SUB1P53999 127 aaKnown RBP eCLIP16.8■□□□□ 0.28
VRK2-201ENST00000340157 CX3CL1P78423 397 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 CCL20P78556 96 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 AKR1C1Q04828 323 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 FFAR4Q5NUL3 377 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 SLC16A13Q7RTY0 426 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 RPP25LQ8N5L8 163 aaKnown RBP16.8■□□□□ 0.28
VRK2-201ENST00000340157 RCC1LQ96I51 464 aaKnown RBP16.8■□□□□ 0.28
VRK2-201ENST00000340157 SCRT1Q9BWW7 348 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 ITPR3Q14573 2671 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 TSPAN15O95858 294 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 TEPPQ6URK8 271 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 ZNF562Q6V9R5 426 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 TMEM144Q7Z5S9 345 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 MRPL41Q8IXM3 137 aaKnown RBP16.8■□□□□ 0.28
VRK2-201ENST00000340157 ZNF709Q8N972 641 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 LINC00052Q96N35 136 aa16.8■□□□□ 0.28
VRK2-201ENST00000340157 SRSF8Q9BRL6 282 aaKnown RBP16.8■□□□□ 0.28
VRK2-201ENST00000340157 MRPL36Q9P0J6 103 aaKnown RBP16.8■□□□□ 0.28
VRK2-201ENST00000340157 F11RQ9Y624 299 aaKnown RBP16.8■□□□□ 0.28
VRK2-201ENST00000340157 H2AFB1P0C5Y9 115 aa16.79■□□□□ 0.28
VRK2-201ENST00000340157 GPX4P36969 197 aaPredicted RBP16.79■□□□□ 0.28
VRK2-201ENST00000340157 OR1P1Q8NH06 330 aa16.79■□□□□ 0.28
VRK2-201ENST00000340157 OR2T6Q8NHC8 308 aa16.79■□□□□ 0.28
VRK2-201ENST00000340157 CACNG8Q8WXS5 425 aa16.79■□□□□ 0.28
VRK2-201ENST00000340157 C17orf112F2Z3M2 114 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 EIF3GO75821 320 aaKnown RBP eCLIP16.78■□□□□ 0.28
VRK2-201ENST00000340157 YIF1AO95070 293 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 IGHV3-48P01763 117 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 DEFA4P12838 97 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 OPRK1P41145 380 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 ASPHD1Q5U4P2 390 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 MIC13Q5XKP0 118 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 BPIFCQ8NFQ6 507 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 TMEM231Q9H6L2 316 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 FAM96BQ9Y3D0 163 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 IGHV7-81A0A0B4J1V7 117 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 J3QLI3 93 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 GCSAMLQ5JQS6 135 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 SFT2D1Q8WV19 159 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 C1RLQ9NZP8 487 aa16.78■□□□□ 0.28
VRK2-201ENST00000340157 TEX15Q9BXT5 2789 aa16.77■□□□□ 0.28
VRK2-201ENST00000340157 EGR2P11161 476 aaPredicted RBP16.77■□□□□ 0.27
VRK2-201ENST00000340157 CTRB1P17538 263 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 CTRB2Q6GPI1 263 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 UQCC3Q6UW78 93 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 WFDC11Q8NEX6 87 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 ABHD5Q8WTS1 349 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 ARPC1AQ92747 370 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 HSPB9Q9BQS6 159 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 PXMP4Q9Y6I8 212 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 CCDC168Q8NDH2 2452 aa16.77■□□□□ 0.27
VRK2-201ENST00000340157 HLA-DRB1P01911 266 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 CRYGCP07315 174 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 TMEM219Q86XT9 240 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 MBD3L1Q8WWY6 194 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 MISP3Q96FF7 219 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 FASNP49327 2511 aaKnown RBP16.76■□□□□ 0.27
VRK2-201ENST00000340157 TRAV1-1A0A0B4J248 108 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 OR10G4Q8NGN3 311 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 OR10G9Q8NGN4 311 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 OR10G7Q8NGN6 311 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 SSX3Q99909 188 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 WNT10AQ9GZT5 417 aa16.76■□□□□ 0.27
VRK2-201ENST00000340157 C9JQL5 133 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 CD5P06127 495 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 M6PRP20645 277 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 ZP3P21754 424 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 PRR20EP86478 221 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 PRR20CP86479 221 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 PRR20DP86480 221 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 PRR20BP86481 221 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 PRR20AP86496 221 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 COMMD1Q8N668 190 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 STPG3Q8N7X2 389 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 ACY3Q96HD9 319 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 SLC35E1Q96K37 410 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 FAM210AQ96ND0 272 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 SLC25A22Q9H936 323 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 SLC45A2Q9UMX9 530 aa16.75■□□□□ 0.27
VRK2-201ENST00000340157 MBP02144 154 aa16.74■□□□□ 0.27
VRK2-201ENST00000340157 LINC00869P0C866 280 aa16.74■□□□□ 0.27
VRK2-201ENST00000340157 LCN15Q6UWW0 184 aa16.74■□□□□ 0.27
VRK2-201ENST00000340157 CIARTQ8N365 385 aaPredicted RBP16.74■□□□□ 0.27
VRK2-201ENST00000340157 C5orf56Q8N8D9 126 aa16.74■□□□□ 0.27
VRK2-201ENST00000340157 RBM14Q96PK6 669 aaKnown RBP16.74■□□□□ 0.27
VRK2-201ENST00000340157 AKAP9Q99996 3911 aa16.74■□□□□ 0.27
VRK2-201ENST00000340157 IGKV1D-37A0A075B6S9 117 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 SH2D7A6NKC9 451 aaPredicted RBP16.73■□□□□ 0.27
VRK2-201ENST00000340157 AMY1AP04745 511 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 OR10J1P30954 320 aa16.73■□□□□ 0.27
VRK2-201ENST00000340157 RPL29P47914 159 aaKnown RBP16.73■□□□□ 0.27
VRK2-201ENST00000340157 FGF8P55075 233 aaPredicted RBP16.73■□□□□ 0.27
VRK2-201ENST00000340157 NPIPB3Q92617 1050 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms