RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 CA2P00918 260 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 TIMP3P35625 211 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 CATR1Q13166 79 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 LHFPL4Q7Z7J7 247 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 QTRT1Q9BXR0 403 aaKnown RBP11.42□□□□□ -0.58
SF1-202ENST00000334944 ZZEF1O43149 2961 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 IGHV2-26A0A0B4J1V2 119 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 C15orf65H3BRN8 121 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 M0R1X1 148 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 CD99P14209 185 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 ATRXP46100 2492 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 GPR12P47775 334 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 LRBAP50851 2863 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 HTD2P86397 168 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 FXYD3Q14802 87 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 MRPL54Q6P161 138 aaKnown RBP11.42□□□□□ -0.58
SF1-202ENST00000334944 C1orf229Q6ZS94 237 aaPredicted RBP11.42□□□□□ -0.58
SF1-202ENST00000334944 KLHDC1Q8N7A1 406 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 OR4F17Q8NGA8 305 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 ZNRD1Q9P1U0 126 aa11.42□□□□□ -0.58
SF1-202ENST00000334944 IGHV1-69-2A0A0G2JMI3 117 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 HSBP1L1C9JCN9 74 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 NUDT3O95989 172 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 OR9G9P0C7N8 305 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 TCF15Q12870 199 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 MBNL2Q5VZF2 373 aaKnown RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 STUMQ69YW2 141 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 OR2D3Q8NGH3 330 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 TRAV3A0A0B4J244 114 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 MUC21A0A0G2JKD1 596 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 MUC21A0A140T8X8 626 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 K7EN84 100 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 TAX1BP3O14907 124 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 ESDP10768 282 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 SELENOVP59797 346 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 EIF4EBP1Q13541 118 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 MORN2Q502X0 79 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 MUC21Q5SSG8 566 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 ABCA4P78363 2273 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 GAGE12BA1L429 117 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 MBD3L4A6NDZ8 208 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 MBD3L3A6NE82 208 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 MBD3L5A6NJ08 208 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 GATA2P23769 480 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 CDC34P49427 236 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 PRRX1P54821 245 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 ZNF841Q6ZN19 808 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 RBMXL3Q8N7X1 1067 aaKnown RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 SLC24A4Q8NFF2 622 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 MBD3L2Q8NHZ7 208 aaPredicted RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 BORCS7Q96B45 105 aa11.41□□□□□ -0.58
SF1-202ENST00000334944 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
SF1-202ENST00000334944 SRRM5B3KS81 715 aa11.4□□□□□ -0.58
SF1-202ENST00000334944 ZNF324O75467 553 aaPredicted RBP11.4□□□□□ -0.58
SF1-202ENST00000334944 TMEM14EPQ6UXP3 125 aa11.4□□□□□ -0.58
SF1-202ENST00000334944 KIR3DL3Q8N743 410 aa11.4□□□□□ -0.58
SF1-202ENST00000334944 Q8TCH9 128 aa11.4□□□□□ -0.58
SF1-202ENST00000334944 MCRIP2Q9BUT9 160 aaKnown RBP11.4□□□□□ -0.58
SF1-202ENST00000334944 MRPS16Q9Y3D3 137 aaKnown RBP11.4□□□□□ -0.58
SF1-202ENST00000334944 CEACAM4O75871 244 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 MMD2Q8IY49 270 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 PRR7Q8TB68 274 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 KCNS1Q96KK3 526 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 P0C879 139 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 SPATA12Q7Z6I5 190 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 MYOD1P15172 320 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 CA7P43166 264 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 CCL8P80075 99 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 PSG9Q00887 426 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 Q0VG73 95 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 STPG3Q8N7X2 389 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 OR10P1Q8NGE3 313 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 SVIPQ8NHG7 77 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 TSKUQ8WUA8 353 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 NPCDR1Q9BY65 106 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 IL36BQ9NZH7 164 aa11.39□□□□□ -0.59
SF1-202ENST00000334944 TET2Q6N021 2002 aaPredicted RBP11.38□□□□□ -0.59
SF1-202ENST00000334944 TRAV8-6A0A0B4J262 113 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 K7ERU9 68 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 DUTP33316 252 aaKnown RBP11.38□□□□□ -0.59
SF1-202ENST00000334944 PRAMEF5Q5TYX0 476 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 FAM216BQ8N7L0 139 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 CCL13Q99616 98 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 LGALS4P56470 323 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 CLEC5AQ9NY25 188 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 PTPRQQ9UMZ3 2332 aa11.38□□□□□ -0.59
SF1-202ENST00000334944 SNAI2O43623 268 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 PMCHL1Q16048 86 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 TIMM23BQ5SRD1 257 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 Q6ZS92 163 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 DOLPP1Q86YN1 238 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 MUC15Q8N387 334 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 RNASE7Q9H1E1 156 aaKnown RBP11.37□□□□□ -0.59
SF1-202ENST00000334944 hDV102S1A0JD36 115 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 SH2D7A6NKC9 451 aaPredicted RBP11.37□□□□□ -0.59
SF1-202ENST00000334944 RRHO14718 337 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 TMPRSS2O15393 492 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 GNG7O60262 68 aa11.37□□□□□ -0.59
SF1-202ENST00000334944 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms