RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 ZNF835Q9Y2P0 537 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 WASHC3Q9Y3C0 194 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 POLEQ07864 2286 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 SHISA9B4DS77 424 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 C9JCJ5 164 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 E7EQL1 145 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 SLC17A3O00476 420 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 OR5G3P0C626 314 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 AREGP15514 252 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 PDLIM4P50479 330 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 PQLC2Q6ZP29 291 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 TGIF2LXQ8IUE1 241 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 TMEM167AQ8TBQ9 72 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 EAF1Q96JC9 268 aaPredicted RBP14.35□□□□□ -0.11
LRCH3-201ENST00000334859 ARL2-SNX15V9GYD0 113 aa14.35□□□□□ -0.11
LRCH3-201ENST00000334859 A0A1W2PN81 502 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 CRYBB3P26998 211 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 GNG4P50150 75 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 ZNF90Q03938 601 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 TBR1Q16650 682 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 CENPWQ5EE01 88 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 ZNF503Q96F45 646 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 WT1-ASQ06250 92 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 DNLZQ5SXM8 178 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 CACNG8Q8WXS5 425 aa14.34□□□□□ -0.11
LRCH3-201ENST00000334859 ZNF430Q9H8G1 570 aaPredicted RBP14.34□□□□□ -0.11
LRCH3-201ENST00000334859 TNFRSF13BO14836 293 aaPredicted RBP14.33□□□□□ -0.12
LRCH3-201ENST00000334859 SLC25A17O43808 307 aa14.33□□□□□ -0.12
LRCH3-201ENST00000334859 IGHV3-48P01763 117 aa14.33□□□□□ -0.12
LRCH3-201ENST00000334859 ERVFC1-1P60608 527 aa14.33□□□□□ -0.12
LRCH3-201ENST00000334859 FAM71F2Q6NXP2 309 aa14.33□□□□□ -0.12
LRCH3-201ENST00000334859 DMRTC2Q8IXT2 367 aaPredicted RBP14.33□□□□□ -0.12
LRCH3-201ENST00000334859 RNASEH2CQ8TDP1 164 aaKnown RBP14.33□□□□□ -0.12
LRCH3-201ENST00000334859 C19orf24Q9BVV8 132 aa14.33□□□□□ -0.12
LRCH3-201ENST00000334859 SPTA1P02549 2419 aa14.33□□□□□ -0.12
LRCH3-201ENST00000334859 HELTA6NFD8 242 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 GGTLC3B5MD39 225 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 OR5I1Q13606 314 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 TMEM155Q4W5P6 130 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 LINC00311Q8N616 119 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 OR4A5Q8NH83 315 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 OR5R1Q8NH85 324 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 TPSG1Q9NRR2 321 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 IL36BQ9NZH7 164 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 IGHV1-69-2A0A0G2JMI3 117 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 ENSAO43768 121 aaKnown RBP14.32□□□□□ -0.12
LRCH3-201ENST00000334859 C8orf88P0DMB2 117 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 GPX4P36969 197 aaPredicted RBP14.32□□□□□ -0.12
LRCH3-201ENST00000334859 SSBP2P81877 361 aaPredicted RBP14.32□□□□□ -0.12
LRCH3-201ENST00000334859 RBPJQ06330 500 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 JOSD1Q15040 202 aaPredicted RBP14.32□□□□□ -0.12
LRCH3-201ENST00000334859 C8orf31Q8N9H6 132 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 ST6GALNAC6Q969X2 333 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 TMEM18Q96B42 140 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 PRO1933Q9H354 126 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 LY96Q9Y6Y9 160 aa14.32□□□□□ -0.12
LRCH3-201ENST00000334859 TPRP12270 2363 aaKnown RBP14.32□□□□□ -0.12
LRCH3-201ENST00000334859 IGHV3-72A0A0B4J1Y9 119 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 IGLV2-23P01705 113 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 IGHV1-8P0DP01 117 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 GZMBP10144 247 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 DLX6P56179 175 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 UBE2L3P68036 154 aaKnown RBP14.31□□□□□ -0.12
LRCH3-201ENST00000334859 VMA21Q3ZAQ7 101 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 PNKDQ8N490 385 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 SLC25A33Q9BSK2 321 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 CGB1A6NKQ9 187 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 TSTD3H0UI37 97 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 REG1AP05451 166 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 CBLN1P23435 193 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 DEFA6Q01524 100 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 MORN5Q5VZ52 161 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 MRPL41Q8IXM3 137 aaKnown RBP14.31□□□□□ -0.12
LRCH3-201ENST00000334859 ZNF596Q8TC21 504 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 FNDC4Q9H6D8 234 aaPredicted RBP14.31□□□□□ -0.12
LRCH3-201ENST00000334859 KAAG1Q9UBP8 84 aa14.31□□□□□ -0.12
LRCH3-201ENST00000334859 TRAV5A0A0B4J249 113 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 A0A1B0GUS0 222 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 COX7A2P2O60397 106 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 FAM87AP0C7U9 286 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 ADMP35318 185 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 SUB1P53999 127 aaKnown RBP eCLIP14.3□□□□□ -0.12
LRCH3-201ENST00000334859 SUMO1P63165 101 aaKnown RBP14.3□□□□□ -0.12
LRCH3-201ENST00000334859 RPEL1Q2QD12 228 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 NPIPB3Q92617 1050 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 MRPL32Q9BYC8 188 aaKnown RBP14.3□□□□□ -0.12
LRCH3-201ENST00000334859 PLXNB1O43157 2135 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 PTPRQQ9UMZ3 2332 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 INS-IGF2F8WCM5 200 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 PKIAP61925 76 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 OR5AU1Q8NGC0 362 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 RITA1Q96K30 269 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 DNAJC4Q9NNZ3 241 aa14.3□□□□□ -0.12
LRCH3-201ENST00000334859 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.29□□□□□ -0.12
LRCH3-201ENST00000334859 CD3EP07766 207 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 ZNF137PP52743 207 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 DLX1P56177 255 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 PRB3Q04118 309 aaPredicted RBP14.29□□□□□ -0.12
LRCH3-201ENST00000334859 TIGITQ495A1 244 aa14.29□□□□□ -0.12
LRCH3-201ENST00000334859 GBGT1Q8N5D6 347 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms