RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 HIST1H1BP16401 226 aaKnown RBP10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 CBLN1P23435 193 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 TNFSF8P32971 234 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 RHOGP84095 191 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 C10orf55Q5SWW7 151 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 C1orf134Q5TEV5 83 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 HSD17B13Q7Z5P4 300 aaPredicted RBP10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 TBC1D26Q86UD7 250 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 CCDC140Q96MF4 163 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 RNF126Q9BV68 326 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 COPZ2Q9P299 210 aa10.79□□□□□ -0.68
CTHRC1-201ENST00000330295 LGALS9O00182 355 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 GSTZ1O43708 216 aaPredicted RBP10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 RBMXL2O75526 392 aaKnown RBP10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 B3GALNT1O75752 331 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 ZNF735P0CB33 412 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 RPA2P15927 270 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 AP3S2P59780 193 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 RND3P61587 244 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 TNP2Q05952 138 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 OR1L6Q8NGR2 347 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 OR1L8Q8NGR8 309 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 OR11H2Q8NH07 326 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 SCGB3A2Q96PL1 93 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 PRRT1Q99946 306 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 QTRT1Q9BXR0 403 aaKnown RBP10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 NXF2Q9GZY0 626 aaKnown RBP10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 THYN1Q9P016 225 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 NDUFA13Q9P0J0 144 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 MLXQ9UH92 298 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 PRNDQ9UKY0 176 aa10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 C14orf166Q9Y224 244 aaKnown RBP10.78□□□□□ -0.68
CTHRC1-201ENST00000330295 HMX3A6NHT5 357 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 TEX22C9J3V5 150 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 IL6RP08887 468 aaPredicted RBP10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 TRAPPC2P0DI81 140 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 TRAPPC2BP0DI82 140 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 PSMB6P28072 239 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 FAUP35544 74 aaKnown RBP10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 PPP5CP53041 499 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 PIGPP57054 158 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 OR2B8PP59922 312 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 SURF2Q15527 256 aaPredicted RBP10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 PYDC2Q56P42 97 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 Q6ZRM9 215 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 H2BFWTQ7Z2G1 175 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 LHFPL1Q86WI0 220 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 HRH4Q9H3N8 390 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 UBQLN2Q9UHD9 624 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 SCP2D1Q9UJQ7 156 aa10.77□□□□□ -0.69
CTHRC1-201ENST00000330295 TRAV10A0A0B4J240 114 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 PTBP1P26599 531 aaKnown RBP eCLIP10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 G6PCP35575 357 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 ZNF585BQ52M93 769 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 SPANXN2Q5MJ10 180 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 OR2C3Q8N628 320 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 OR5B3Q8NH48 314 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 OR4A16Q8NH70 328 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 TMEM56Q96MV1 263 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 HINT2Q9BX68 163 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 AKIP1Q9NQ31 210 aa10.76□□□□□ -0.69
CTHRC1-201ENST00000330295 TRBV9A0A0B4J1U6 114 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 TEX13DA0A0J9YY54 714 aaPredicted RBP10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 C3orf85A0A1B0GTC6 90 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 OR2J3O76001 311 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 AMBPP02760 352 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 PRH1P02810 166 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 CRYGCP07315 174 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 CTSDP07339 412 aaPredicted RBP10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 RBMY1CP0DJD4 496 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 PI3P19957 117 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 LORP23490 312 aaPredicted RBP10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 EXOSC2Q13868 293 aaKnown RBP10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 TRIM16LQ309B1 348 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 C15orf32Q32M92 178 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 OR4D10Q8NGI6 311 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 OR13C8Q8NGS7 320 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 EEF1AKMT3Q96AZ1 226 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 GALNT14Q96FL9 552 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 CXorf58Q96LI9 332 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 MCUBQ9NWR8 336 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 OR51B2Q9Y5P1 312 aa10.75□□□□□ -0.69
CTHRC1-201ENST00000330295 TRAV3A0A0B4J244 114 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 TRAV25A0A0B4J276 109 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 TEX50A0A1B0GTY4 177 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 ANKRD20A5PA0PJZ0 165 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 AREGP15514 252 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 HLA-DMBP28068 263 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 AKR1C2P52895 323 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 C4orf48Q5BLP8 95 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 BTNL8Q6UX41 500 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 Q6ZTC4 211 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 UXS1Q8NBZ7 420 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 OR4C16Q8NGL9 310 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 RNASE11Q8TAA1 199 aaKnown RBP10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 MARCH1Q8TCQ1 289 aa10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 LSM10Q969L4 123 aaKnown RBP10.74□□□□□ -0.69
CTHRC1-201ENST00000330295 RRNAD1Q96FB5 475 aaKnown RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms