RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 TOMM20LQ6UXN7 152 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 BAGE3Q86Y29 109 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 BAGE2Q86Y30 109 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 DOLPP1Q86YN1 238 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 OSR1Q8TAX0 266 aaPredicted RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 CACNG8Q8WXS5 425 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 FAM167A-AS1Q96KT0 104 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 MRPL32Q9BYC8 188 aaKnown RBP7.08□□□□□ -1.28
CLK1-201ENST00000321356 GNB4Q9HAV0 340 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 LINC00312Q9Y6C7 94 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 DYSFO75923 2080 aa7.08□□□□□ -1.28
CLK1-201ENST00000321356 DEFB109BQ30KR1 87 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 TDRG1Q3Y452 100 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 ALKBH2Q6NS38 261 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 RPRMLQ8N4K4 120 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 DEFB108BQ8NET1 73 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 OR10W1Q8NGF6 305 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 ZNF714Q96N38 554 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 RNF2Q99496 336 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 MIEN1Q9BRT3 115 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 RNASE7Q9H1E1 156 aaKnown RBP7.07□□□□□ -1.28
CLK1-201ENST00000321356 NDUFA4L2Q9NRX3 87 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 ZNRD1Q9P1U0 126 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 BOD1L1Q8NFC6 3051 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 YLPM1P49750 1951 aaKnown RBP7.07□□□□□ -1.28
CLK1-201ENST00000321356 CACNA1HO95180 2353 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 ICE1Q9Y2F5 2266 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 hADV38S2A0JD32 116 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 M0QZK8 103 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 GPX1P07203 203 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 FTH1P19P0C7X4 201 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 BRS3P32247 399 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 SELENOVP59797 346 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 SUMO1P63165 101 aaKnown RBP7.07□□□□□ -1.28
CLK1-201ENST00000321356 ZNF124Q15973 351 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 MLANAQ16655 118 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 TMEM177Q53S58 311 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 MORN5Q5VZ52 161 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 IGF2-ASQ6U949 168 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 IGFL3Q6UXB1 125 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 Q8N976 141 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 SNRNP40Q96DI7 357 aaKnown RBP7.07□□□□□ -1.28
CLK1-201ENST00000321356 SLC25A2Q9BXI2 301 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 NAT8BQ9UHF3 227 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 FBXL7Q9UJT9 491 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 CDC42EP3Q9UKI2 254 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 RNF114Q9Y508 228 aa7.07□□□□□ -1.28
CLK1-201ENST00000321356 OTOGLQ3ZCN5 2332 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 H0YJW9 148 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 BMPR1BO00238 502 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 DLL1O00548 723 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 HLA-DQA1P01909 254 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 AMY1AP04745 511 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 TNFSF4P23510 183 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 MEF2CQ06413 473 aaPredicted RBP7.06□□□□□ -1.28
CLK1-201ENST00000321356 FXYD3Q14802 87 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 TMEM183BQ1AE95 376 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 IBA57Q5T440 356 aaKnown RBP7.06□□□□□ -1.28
CLK1-201ENST00000321356 C1orf185Q5T7R7 199 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 ZADH2Q8N4Q0 377 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 OR5AN1Q8NGI8 311 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 ATG101Q9BSB4 218 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 MRPL20Q9BYC9 149 aaKnown RBP7.06□□□□□ -1.28
CLK1-201ENST00000321356 SAMD10Q9BYL1 202 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 COMMD5Q9GZQ3 224 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 PARD6AQ9NPB6 346 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 DCAF16Q9NXF7 216 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 ASPMQ8IZT6 3477 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 CUL9Q8IWT3 2517 aa7.06□□□□□ -1.28
CLK1-201ENST00000321356 SPAARA0A1B0GVQ0 90 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 APOA2P02652 100 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 CD40P25942 277 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 CEACAM8P31997 349 aaPredicted RBP7.05□□□□□ -1.28
CLK1-201ENST00000321356 RPL8P62917 257 aaKnown RBP7.05□□□□□ -1.28
CLK1-201ENST00000321356 UBE2L3P68036 154 aaKnown RBP7.05□□□□□ -1.28
CLK1-201ENST00000321356 C22orf34Q6ZV56 151 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 SIGLECL1Q8N7X8 197 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 DEFB124Q8NES8 71 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 NUP37Q8NFH4 326 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 TMEM167AQ8TBQ9 72 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 VN1R17PQ8TDU5 208 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 WIPF2Q8TF74 440 aaPredicted RBP7.05□□□□□ -1.28
CLK1-201ENST00000321356 RND1Q92730 232 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 MBD6Q96DN6 1003 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 KCNS1Q96KK3 526 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 HARBI1Q96MB7 349 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 VAMP8Q9BV40 100 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 GAL3ST2Q9H3Q3 398 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 DNAJC4Q9NNZ3 241 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 ZNF586Q9NXT0 402 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 NAV3Q8IVL0 2385 aa7.05□□□□□ -1.28
CLK1-201ENST00000321356 A0A1W2PS18 150 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 IZUMO1RA6ND01 250 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 CGB1A6NKQ9 187 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 FCN3O75636 299 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 FSTL3O95633 263 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 REG1AP05451 166 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 IRF2P14316 349 aa7.04□□□□□ -1.28
CLK1-201ENST00000321356 USF1P22415 310 aaPredicted RBP7.04□□□□□ -1.28
CLK1-201ENST00000321356 TCL1AP56279 114 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms