RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 ZNF784Q8NCA9 323 aaPredicted RBP14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BHQ93079 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BNQ99877 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HIST1H2BMQ99879 126 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 HBDP02042 147 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 ZNF124Q15973 351 aa14.31□□□□□ -0.12
SMCHD1-201ENST00000320876 IGHV3-48P01763 117 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 GGTLC3B5MD39 225 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 ADMP35318 185 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 ERVK11-1P61568 191 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 COL11A2P13942 1736 aaPredicted RBP14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 ANAPC1Q9H1A4 1944 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 TM2D1Q9BX74 207 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 ZP1P60852 638 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 ZIC3O60481 467 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 CD160O95971 181 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 CYSLTR1Q9Y271 337 aa14.3□□□□□ -0.12
SMCHD1-201ENST00000320876 RPL39P5Q59GN2 51 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 A0A0G2JLM5 398 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 IFI27L2Q9H2X8 130 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 CHODLQ9H9P2 273 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 UCNP55089 124 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 ORMDL2Q53FV1 153 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 TOMM7Q9P0U1 55 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 CTSSP25774 331 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 ZNF501Q96CX3 271 aaPredicted RBP14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 RNF115Q9Y4L5 304 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 PPBPP02775 128 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 IGFBP2P18065 325 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 HSD52Q0P140 79 aa14.29□□□□□ -0.12
SMCHD1-201ENST00000320876 GREB1LQ9C091 1923 aaPredicted RBP14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 IGKV3-20P01619 116 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 TDGF1P13385 188 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 TMEM42Q69YG0 159 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 A0A1W2PRS3 328 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 EGR1P18146 543 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 ATXN8Q156A1 80 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 ASCL2Q99929 193 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 PIN1P1O15428 100 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 CRPP02741 224 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 FOXA2Q9Y261 457 aaPredicted RBP14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 ADAMTS7Q9UKP4 1686 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 VKORC1Q9BQB6 163 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 ACP7Q6ZNF0 438 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 TMEM190Q8WZ59 177 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 GAGE2BQ13066 116 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 GAGE2EQ4V326 116 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 RNASE7Q9H1E1 156 aaKnown RBP14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 GAGE2DQ9UEU5 116 aa14.28□□□□□ -0.12
SMCHD1-201ENST00000320876 ORAOV1Q8WV07 137 aa14.27□□□□□ -0.12
SMCHD1-201ENST00000320876 TMEM54Q969K7 222 aa14.27□□□□□ -0.12
SMCHD1-201ENST00000320876 PLXNA2O75051 1894 aa14.27□□□□□ -0.12
SMCHD1-201ENST00000320876 CCL19Q99731 98 aa14.27□□□□□ -0.12
SMCHD1-201ENST00000320876 OTORQ9NRC9 128 aa14.27□□□□□ -0.12
SMCHD1-201ENST00000320876 IGKCP01834 107 aa14.27□□□□□ -0.12
SMCHD1-201ENST00000320876 TRGV3P03979 118 aa14.27□□□□□ -0.12
SMCHD1-201ENST00000320876 UCP1P25874 307 aa14.27□□□□□ -0.13
SMCHD1-201ENST00000320876 MS4A6AQ9H2W1 248 aa14.27□□□□□ -0.13
SMCHD1-201ENST00000320876 IGHV1-69-2A0A0G2JMI3 117 aa14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 RPL23P62829 140 aaKnown RBP14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 ATP5L2Q7Z4Y8 100 aa14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 CACNA1EQ15878 2313 aa14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 M0R2P5 195 aa14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 SAA1P0DJI8 122 aaPredicted RBP14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 RTBDNQ9BSG5 229 aaPredicted RBP14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 TMEM242Q9NWH2 141 aa14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 PILRAQ9UKJ1 303 aa14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 LGALS1P09382 135 aaKnown RBP14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 ZNF688P0C7X2 276 aa14.26□□□□□ -0.13
SMCHD1-201ENST00000320876 PNKDQ8N490 385 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 CHTOPQ9Y3Y2 248 aaKnown RBP14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 CCL20P78556 96 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 OR9G4Q8NGQ1 327 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 ARPC1AQ92747 370 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 SIPA1L1O43166 1804 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 ITGBL1O95965 494 aaPredicted RBP14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 CENPVQ7Z7K6 275 aaPredicted RBP14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 FAM57AQ8TBR7 257 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 SPANXA1Q9NS26 97 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 PLXNB3Q9ULL4 1909 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 LINC01549A6NIU2 74 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 B9A039 149 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 TMEM238C9JI98 176 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 PF4P02776 101 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 PRSS53Q2L4Q9 553 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 TMEM86BQ8N661 226 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 SEPSECSQ9HD40 501 aaKnown RBP14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 ATP5G3P48201 142 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 ZNF479Q96JC4 524 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 SRXN1Q9BYN0 137 aa14.25□□□□□ -0.13
SMCHD1-201ENST00000320876 C1QCP02747 245 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 COX6B1P14854 86 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 ZNF703Q9H7S9 590 aaPredicted RBP14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 ZNF362Q5T0B9 420 aaPredicted RBP14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 ZNF562Q6V9R5 426 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 OBSL1O75147 1896 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 LY6EQ16553 131 aa14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.24□□□□□ -0.13
SMCHD1-201ENST00000320876 C1QL4Q86Z23 238 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms