RNA–Protein interactions for RNA: ENST00000313708.10

EBF1-201, Transcript of early B cell factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EBF1, Length 5,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-201ENST00000313708 RBPMS2Q6ZRY4 209 aaKnown RBP10.28□□□□□ -0.76
EBF1-201ENST00000313708 ZNF524Q96C55 264 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 MGST2Q99735 147 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 VCX2Q9H322 139 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 PTGDSP41222 190 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 PCSK4Q6UW60 755 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 MMP17Q9ULZ9 603 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 NLRC5Q86WI3 1866 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 hCG_38984A0A1B0GV85 526 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 F8W1H4 67 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 SH2D6Q7Z4S9 175 aa10.28□□□□□ -0.76
EBF1-201ENST00000313708 C9orf172C9J069 976 aa10.27□□□□□ -0.76
EBF1-201ENST00000313708 GAGE5Q13069 117 aa10.27□□□□□ -0.76
EBF1-201ENST00000313708 GAGE6Q13070 117 aa10.27□□□□□ -0.76
EBF1-201ENST00000313708 TWIST1Q15672 202 aa10.27□□□□□ -0.76
EBF1-201ENST00000313708 CENPVQ7Z7K6 275 aaPredicted RBP10.27□□□□□ -0.76
EBF1-201ENST00000313708 K7ERJ3 54 aa10.27□□□□□ -0.76
EBF1-201ENST00000313708 LGALS7P47929 136 aa10.27□□□□□ -0.76
EBF1-201ENST00000313708 ATP5L2Q7Z4Y8 100 aa10.27□□□□□ -0.76
EBF1-201ENST00000313708 H3BMG7 143 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 OR9G9P0C7N8 305 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 ANXA2RQ3ZCQ2 193 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 FADS6Q8N9I5 356 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 PRELID3AQ96N28 172 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 IGKV3-11P04433 115 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 PHF3Q92576 2039 aaKnown RBP10.27□□□□□ -0.77
EBF1-201ENST00000313708 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
EBF1-201ENST00000313708 WISP1O95388 367 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 HERV-K104P63124 156 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 PSG7Q13046 419 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 LCNL1Q6ZST4 164 aa10.27□□□□□ -0.77
EBF1-201ENST00000313708 ZNF837Q96EG3 531 aaPredicted RBP10.27□□□□□ -0.77
EBF1-201ENST00000313708 LYZP61626 148 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 SRSF7Q16629 238 aaKnown RBP eCLIP10.26□□□□□ -0.77
EBF1-201ENST00000313708 RNFT1Q5M7Z0 435 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 FOXC2Q99958 501 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 NKX2-8O15522 239 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 IL23AQ9NPF7 189 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 SCRT2Q9NQ03 307 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 TMEM262E9PQX1 116 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 LINC00173Q6ZV60 143 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 PKIBQ9C010 78 aa10.26□□□□□ -0.77
EBF1-201ENST00000313708 A0A1B0GUT8 65 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 PRTN3P24158 256 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 FCGR2BP31994 310 aaPredicted RBP10.25□□□□□ -0.77
EBF1-201ENST00000313708 TMEM164Q5U3C3 297 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 SSC4DQ8WTU2 575 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 SYNGR3O43761 229 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 AREGP15514 252 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 KIR2DL2P43627 348 aaPredicted RBP10.25□□□□□ -0.77
EBF1-201ENST00000313708 C10orf128Q5T292 105 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 AMTNQ6UX39 209 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 RPS19BP1Q86WX3 136 aaKnown RBP10.25□□□□□ -0.77
EBF1-201ENST00000313708 KIR3DL3Q8N743 410 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 ZNF502Q8TBZ5 544 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 VGLL1Q99990 258 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 FOXI3A8MTJ6 420 aaPredicted RBP10.25□□□□□ -0.77
EBF1-201ENST00000313708 PPIFP30405 207 aaKnown RBP10.25□□□□□ -0.77
EBF1-201ENST00000313708 ATP5G2Q06055 141 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 TEX45Q8NA69 505 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 FLVCR1-AS1Q8TAF5 88 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 PRNDQ9UKY0 176 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 MZT1Q08AG7 82 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 OR4F17Q8NGA8 305 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 LINC00479Q96M42 142 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 CHAC1Q9BUX1 264 aa10.25□□□□□ -0.77
EBF1-201ENST00000313708 SLC25A10Q9UBX3 287 aaPredicted RBP10.25□□□□□ -0.77
EBF1-201ENST00000313708 SPTY2D1-AS1A0A0U1RR47 76 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 IGHV3-48P01763 117 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 ZNF718Q3SXZ3 478 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 PYYP10082 97 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 KIR2DL1P43626 348 aaPredicted RBP10.24□□□□□ -0.77
EBF1-201ENST00000313708 SPEM1Q8N4L4 309 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 SLC25A33Q9BSK2 321 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 MAP1LC3AQ9H492 121 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 RBP4P02753 201 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 ZNF766Q5HY98 468 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 H1FXQ92522 213 aaKnown RBP10.24□□□□□ -0.77
EBF1-201ENST00000313708 TMEM54Q969K7 222 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 MRPL32Q9BYC8 188 aaKnown RBP10.24□□□□□ -0.77
EBF1-201ENST00000313708 BOKQ9UMX3 212 aaPredicted RBP10.24□□□□□ -0.77
EBF1-201ENST00000313708 SPAARA0A1B0GVQ0 90 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 SMIM27A0A1W2PRY6 76 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 HOXA3O43365 443 aaPredicted RBP10.24□□□□□ -0.77
EBF1-201ENST00000313708 ZNF585BQ52M93 769 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 IFI27L1Q96BM0 104 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 YLPM1P49750 1951 aaKnown RBP10.24□□□□□ -0.77
EBF1-201ENST00000313708 ESPL1Q14674 2120 aa10.24□□□□□ -0.77
EBF1-201ENST00000313708 KIF26AQ9ULI4 1882 aaPredicted RBP10.23□□□□□ -0.77
EBF1-201ENST00000313708 IGKV1-6A0A0C4DH72 117 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 IGKV1-39P01597 117 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 HBDP02042 147 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 IGKV1D-39P04432 117 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 NTF4P34130 210 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 HSPE1P61604 102 aaKnown RBP10.23□□□□□ -0.77
EBF1-201ENST00000313708 C11orf1Q9H5F2 150 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 AAMDCQ9H7C9 122 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 DENND4CQ5VZ89 1909 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 RAC3P60763 192 aa10.23□□□□□ -0.77
EBF1-201ENST00000313708 KIAA2026Q5HYC2 2103 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms