RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 A0A1W2PS18 150 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 LEPP41159 167 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 GAGE13Q4V321 117 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 PSMG4Q5JS54 123 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 TPTE2P1Q5T6R2 138 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 PCSK4Q6UW60 755 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 IDI2-AS1Q9NZ38 188 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 PSMB11A5LHX3 300 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 NPFFO15130 113 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 UCP2P55851 309 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 WDR82Q6UXN9 313 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 GATAD1Q8WUU5 269 aa6.9□□□□□ -1.31
VPS41-202ENST00000310301 TRAV30A0A087WSZ9 112 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 COLCA2A8K830 154 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 WNT9BO14905 357 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 AMBPP02760 352 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 GAGE2BQ13066 116 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 GAGE2EQ4V326 116 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 ZNF585BQ52M93 769 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 RNASEH2CQ8TDP1 164 aaKnown RBP6.89□□□□□ -1.31
VPS41-202ENST00000310301 PRDM14Q9GZV8 571 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 RNASE7Q9H1E1 156 aaKnown RBP6.89□□□□□ -1.31
VPS41-202ENST00000310301 GAGE2DQ9UEU5 116 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 MIA3Q5JRA6 1907 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 HIGD1CA8MV81 97 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 BTCP35070 178 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 PAX2Q02962 417 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 DDB2Q92466 427 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 CHCHD2Q9Y6H1 151 aaPredicted RBP6.89□□□□□ -1.31
VPS41-202ENST00000310301 A0A0G2JK05 382 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 A8MWV9 139 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 RNF126Q9BV68 326 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 GTSF1LQ9H1H1 148 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 VWA8A3KMH1 1905 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.89□□□□□ -1.31
VPS41-202ENST00000310301 CXCL1P09341 107 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 OR10J3Q5JRS4 329 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 ZNF479Q96JC4 524 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 PLXNA4Q9HCM2 1894 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 ADRA2AP08913 450 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 IGFBP2P18065 325 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 SEC11AP67812 179 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 CCL8P80075 99 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 ORMDL3Q8N138 153 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 SLC25A28Q96A46 364 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 FMC1Q96HJ9 113 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 NAA38Q9BRA0 125 aaKnown RBP6.89□□□□□ -1.31
VPS41-202ENST00000310301 NPFFR1Q9GZQ6 430 aa6.89□□□□□ -1.31
VPS41-202ENST00000310301 LTBP2Q14767 1821 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 hCG_38984A0A1B0GV85 526 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 ESDP10768 282 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 TSPOP30536 169 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 UNQ5815/PRO19632Q6UWF5 114 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 SAXO1Q8IYX7 474 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 PKIBQ9C010 78 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 RALGAPA1Q6GYQ0 2036 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 ODAMA1E959 279 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 M0R381 172 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 NBEAP1P0C6P0 100 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 TRBV7-9A0A0J9YWB2 115 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 FGF16O43320 207 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 C1orf194Q5T5A4 169 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 LINC01590Q5TEZ4 76 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 SELENOKQ9Y6D0 94 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 CTSBP07858 339 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 C1QL4Q86Z23 238 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 CTHRC1Q96CG8 243 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 CITED1Q99966 193 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 C2orf88Q9BSF0 95 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 SCN3AQ9NY46 2000 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 JPT1Q9UK76 154 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 LY6G6EA0A0G2JKS1 128 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 A0A1B0GW15 77 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 MIR17HGQ75NE6 70 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 OR10W1Q8NGF6 305 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 U3KQA8 63 aa6.88□□□□□ -1.31
VPS41-202ENST00000310301 F8VVB4 439 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 F8VWA3 439 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 J3QW42 95 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 HSD52Q0P140 79 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 TMEM155Q4W5P6 130 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 FAM159AQ6UWV7 190 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 LPAR2Q9HBW0 351 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 C9JCJ5 164 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 ZNF525Q8N782 197 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 ST20Q9HBF5 79 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 METRNQ9UJH8 293 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 TRAV21A0A0B4J279 112 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 A0A1B0GTI1 187 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 NPIPB4C9JG80 1138 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 PF4V1P10720 104 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 TEX45Q8NA69 505 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 ITLN1Q8WWA0 313 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 CITED2Q99967 270 aaPredicted RBP6.87□□□□□ -1.31
VPS41-202ENST00000310301 DPM2O94777 84 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 FAM106CPP0CH98 169 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 PRTN3P24158 256 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 FAM27E3Q08E93 113 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 UBE2V1Q13404 147 aa6.87□□□□□ -1.31
VPS41-202ENST00000310301 BDP1A6H8Y1 2624 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms