RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 IGKV2-40A0A087WW87 121 aaPredicted RBP10.38□□□□□ -0.75
ABCA3-201ENST00000301732 C21orf140B9A014 251 aa10.38□□□□□ -0.75
ABCA3-201ENST00000301732 IGKV2D-40P01614 121 aaPredicted RBP10.38□□□□□ -0.75
ABCA3-201ENST00000301732 HGFACQ04756 655 aa10.38□□□□□ -0.75
ABCA3-201ENST00000301732 UNQ9370/PRO34162Q6UXP9 181 aa10.38□□□□□ -0.75
ABCA3-201ENST00000301732 RPS20P60866 119 aaKnown RBP10.37□□□□□ -0.75
ABCA3-201ENST00000301732 ZNF474Q6S9Z5 364 aaPredicted RBP10.37□□□□□ -0.75
ABCA3-201ENST00000301732 CCL19Q99731 98 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 MYOD1P15172 320 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 FOCADQ5VW36 1801 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 UMODP07911 640 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 TIMM23BQ5SRD1 257 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 OR9G1Q8NH87 305 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 DOCK2Q92608 1830 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 A8MXK9 166 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 SMKR1H3BMG3 65 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 COX6B1P14854 86 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 NDUFS8O00217 210 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 ORMDL3Q8N138 153 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 TMEM256Q8N2U0 113 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 FDCSPQ8NFU4 85 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 PLPPR1Q8TBJ4 325 aa10.37□□□□□ -0.75
ABCA3-201ENST00000301732 ALS2Q96Q42 1657 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 A0A1B0GUS0 222 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 SRSF8Q9BRL6 282 aaKnown RBP10.36□□□□□ -0.75
ABCA3-201ENST00000301732 ATP5LO75964 103 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 SAMD5Q5TGI4 173 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 SHISA5Q8N114 240 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 KIAA1551Q9HCM1 1747 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 PSG1P11464 419 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 COX6A1P12074 109 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 JPT1Q9UK76 154 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 IGKV1D-8A0A087WSZ0 117 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 IZUMO1RA6ND01 250 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 PRR19A6NJB7 356 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 ACP7Q6ZNF0 438 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 NEUROG1Q92886 237 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 HIST1H2BLQ99880 126 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 H0YIZ8 118 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 TMEM250H0YL14 139 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 VCX2Q9H322 139 aa10.36□□□□□ -0.75
ABCA3-201ENST00000301732 TRBV9A0A0B4J1U6 114 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 ZNF729A6NN14 1252 aaPredicted RBP10.35□□□□□ -0.75
ABCA3-201ENST00000301732 PRR33A8MZF0 331 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 RPL15P61313 204 aaKnown RBP10.35□□□□□ -0.75
ABCA3-201ENST00000301732 SRSF6Q13247 344 aaKnown RBP10.35□□□□□ -0.75
ABCA3-201ENST00000301732 EXOC3-AS1Q8N2X6 119 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 ZNF525Q8N782 197 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 BTCP35070 178 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 C10orf55Q5SWW7 151 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 FBLIM1Q8WUP2 373 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 MRPS16Q9Y3D3 137 aaKnown RBP10.35□□□□□ -0.75
ABCA3-201ENST00000301732 A0A0G2JK05 382 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 CD8AP01732 235 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 GPX4P36969 197 aaPredicted RBP10.35□□□□□ -0.75
ABCA3-201ENST00000301732 CFAP161Q6P656 301 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 C5orf30Q96GV9 206 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 LRTM2Q8N967 370 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 TNFRSF14Q92956 283 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 LINC00477Q96M19 166 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 CARHSP1Q9Y2V2 147 aaKnown RBP10.35□□□□□ -0.75
ABCA3-201ENST00000301732 EP300Q09472 2414 aaPredicted RBP10.35□□□□□ -0.75
ABCA3-201ENST00000301732 TDGF1P3P51864 188 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 LINC00158P58513 81 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 SLC25A15Q9Y619 301 aa10.35□□□□□ -0.75
ABCA3-201ENST00000301732 CHTOPQ9Y3Y2 248 aaKnown RBP10.34□□□□□ -0.75
ABCA3-201ENST00000301732 EPOPA6NHQ4 379 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 TCRAP04437 139 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 NDPQ00604 133 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 TMEM42Q69YG0 159 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 CECR9P0C854 216 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 CD28P10747 220 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 BSPH1Q075Z2 132 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 STPG1Q5TH74 334 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 PPP1R27Q86WC6 154 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 IMMP1LQ96LU5 166 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 NDUFAF3Q9BU61 184 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 SAA2-SAA4A0A096LPE2 208 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 SAA2P0DJI9 122 aaPredicted RBP10.34□□□□□ -0.75
ABCA3-201ENST00000301732 C1orf174Q8IYL3 243 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 CFHR5Q9BXR6 569 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 MRPL32Q9BYC8 188 aaKnown RBP10.34□□□□□ -0.75
ABCA3-201ENST00000301732 RNF115Q9Y4L5 304 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 PRB2P02812 416 aaPredicted RBP10.34□□□□□ -0.75
ABCA3-201ENST00000301732 GLRX5Q86SX6 157 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 ZNF479Q96JC4 524 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 ZNF831Q5JPB2 1677 aa10.34□□□□□ -0.75
ABCA3-201ENST00000301732 TIMP3P35625 211 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 FHL5Q5TD97 284 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 SEPSECSQ9HD40 501 aaKnown RBP10.33□□□□□ -0.76
ABCA3-201ENST00000301732 ZNF319Q9P2F9 582 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 COX11Q9Y6N1 276 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 ABCA7Q8IZY2 2146 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 RS1O15537 224 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 NSUN5P1Q3KNT7 163 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 CIARTQ8N365 385 aaPredicted RBP10.33□□□□□ -0.76
ABCA3-201ENST00000301732 C21orf62Q9NYP8 219 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 OR9G9P0C7N8 305 aa10.33□□□□□ -0.76
ABCA3-201ENST00000301732 CITED1Q99966 193 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms