RNA–Protein interactions for RNA: ENST00000301280.9

CHAF1A-201, Transcript of chromatin assembly factor 1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAF1A, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-201ENST00000301280 MBP02144 154 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 PYYP10082 97 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 CR1LQ2VPA4 569 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 ZNF714Q96N38 554 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 YTHDF2Q9Y5A9 579 aaKnown RBP12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 CT45A6P0DMU7 189 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 CT45A5P0DMU8 189 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 CT45A7P0DMV0 189 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 RANP62826 216 aaKnown RBP12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 SSX2Q16385 188 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 TMEM183AQ8IXX5 376 aa12.74□□□□□ -0.37
CHAF1A-201ENST00000301280 ZNF705FA8MVS1 300 aaPredicted RBP12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 YPEL1O60688 119 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 ZNF705DP0CH99 300 aaPredicted RBP12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 ZNF705BP0CI00 300 aaPredicted RBP12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 GNB2P62879 340 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 JOSD1Q15040 202 aaPredicted RBP12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 ATP6V1FQ16864 119 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 TMEM200BQ69YZ2 307 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 FLYWCH2Q96CP2 140 aaKnown RBP12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 YPEL2Q96QA6 119 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 RNASE7Q9H1E1 156 aaKnown RBP12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 TAS2R60P59551 318 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 HTD2P86397 168 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 OCC1Q8TAD7 63 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 P2RX4Q99571 388 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 WDR83OSQ9Y284 106 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 RAXQ9Y2V3 346 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 TRAPPC1Q9Y5R8 145 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 CCL21O00585 134 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 RBFOX2O43251 390 aaKnown RBP eCLIP12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 ARF6P62330 175 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 EFNB3Q15768 340 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 LRRC10Q5BKY1 277 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 PQLC2Q6ZP29 291 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 C1orf174Q8IYL3 243 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 PITPNC1Q9UKF7 332 aa12.73□□□□□ -0.37
CHAF1A-201ENST00000301280 FLNCQ14315 2725 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 IER3P46695 156 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 RAB7AP51149 207 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 HLA-DRB5Q30154 266 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 NABP2Q9BQ15 211 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 CNIH1O95406 144 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 TGIF2LXQ8IUE1 241 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 OR5R1Q8NH85 324 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 IL19Q9UHD0 177 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 EREGO14944 169 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 OR1B1Q8NGR6 318 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 ATG101Q9BSB4 218 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 TMEM106BQ9NUM4 274 aa12.72□□□□□ -0.37
CHAF1A-201ENST00000301280 VSTM5A8MXK1 200 aa12.71□□□□□ -0.37
CHAF1A-201ENST00000301280 TSTD3H0UI37 97 aa12.71□□□□□ -0.37
CHAF1A-201ENST00000301280 TIMP3P35625 211 aa12.71□□□□□ -0.37
CHAF1A-201ENST00000301280 PNRC1Q12796 327 aaPredicted RBP12.71□□□□□ -0.37
CHAF1A-201ENST00000301280 MORN5Q5VZ52 161 aa12.71□□□□□ -0.37
CHAF1A-201ENST00000301280 OR1P1Q8NH06 330 aa12.71□□□□□ -0.37
CHAF1A-201ENST00000301280 SFXN3Q9BWM7 321 aa12.71□□□□□ -0.37
CHAF1A-201ENST00000301280 C15orf61A6NNL5 157 aa12.71□□□□□ -0.38
CHAF1A-201ENST00000301280 CYP2G1PQ6ZSU1 146 aa12.71□□□□□ -0.38
CHAF1A-201ENST00000301280 PYGO2Q9BRQ0 406 aa12.71□□□□□ -0.38
CHAF1A-201ENST00000301280 TRBV20OR9-2A0A075B6H5 130 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 UBE2L3P68036 154 aaKnown RBP12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 UTP20O75691 2785 aaKnown RBP12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 SORL1Q92673 2214 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 TEX50A0A1B0GTY4 177 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 CEACAM4O75871 244 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 LINC00869P0C866 280 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 GCHFRP30047 84 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 CFHR2P36980 270 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 LY6DQ14210 128 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 ZNF124Q15973 351 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 BATFQ16520 125 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 KLF17Q5JT82 389 aaPredicted RBP12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 DNLZQ5SXM8 178 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 OR8I2Q8N0Y5 310 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 TMEM256Q8N2U0 113 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 TPPP3Q9BW30 176 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 SRD5A3Q9H8P0 318 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 THBDP07204 575 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 RHOBP62745 196 aa12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 RNASEH2CQ8TDP1 164 aaKnown RBP12.7□□□□□ -0.38
CHAF1A-201ENST00000301280 FAM90A9PA6NNJ1 464 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 RPL8P62917 257 aaKnown RBP12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 GNG5P63218 68 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 ERHP84090 104 aaKnown RBP12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 KCNIP4Q6PIL6 250 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 SLC35E1Q96K37 410 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 C2orf88Q9BSF0 95 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 IGKV1OR2-108A0A075B7D4 117 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 COX7A2P2O60397 106 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 IGHV3-23P01764 117 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 CAMPP49913 170 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 NUBP1P53384 320 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 C3orf36Q3SXR2 165 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 ZNF788Q6ZQV5 615 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 Q8N7P7 452 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 DIRC2Q96SL1 478 aa12.69□□□□□ -0.38
CHAF1A-201ENST00000301280 FBXL15Q9H469 300 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms