RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 SEPSECSQ9HD40 501 aaKnown RBP11.07□□□□□ -0.64
CTDP1-202ENST00000299543 DPRXA6NFQ7 191 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 SRRM5B3KS81 715 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 K7ERU9 68 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 TCTAP57738 103 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 MOB3BQ86TA1 216 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 UHRF2Q96PU4 802 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 NAA38Q9BRA0 125 aaKnown RBP11.06□□□□□ -0.64
CTDP1-202ENST00000299543 GCM1Q9NP62 436 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 SLC45A2Q9UMX9 530 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 GFRA3O60609 400 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 TOMM40O96008 361 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 PPBPP02775 128 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 GGTLC1Q9BX51 225 aa11.06□□□□□ -0.64
CTDP1-202ENST00000299543 GNG7O60262 68 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 HLA-DRB5Q30154 266 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 IFI27L2Q9H2X8 130 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 PLSCR4Q9NRQ2 329 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 JPT1Q9UK76 154 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 ANKRD11Q6UB99 2663 aaPredicted RBP11.05□□□□□ -0.64
CTDP1-202ENST00000299543 ABCA4P78363 2273 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 DSCAMO60469 2012 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 SNAI2O43623 268 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 NPY1RP25929 384 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 SRP14P37108 136 aaKnown RBP11.05□□□□□ -0.64
CTDP1-202ENST00000299543 MZT1Q08AG7 82 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 CT45A1Q5HYN5 189 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 MRPL54Q6P161 138 aaKnown RBP11.05□□□□□ -0.64
CTDP1-202ENST00000299543 LHFPL4Q7Z7J7 247 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 C1orf174Q8IYL3 243 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 CT45A3Q8NHU0 189 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 FAM216AQ8WUB2 273 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 DKK4Q9UBT3 224 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 SAA2-SAA4A0A096LPE2 208 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 PDE6DO43924 150 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 SAA2P0DJI9 122 aaPredicted RBP11.05□□□□□ -0.64
CTDP1-202ENST00000299543 CD99P14209 185 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 TSPOP30536 169 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 CCL8P80075 99 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 FAM216BQ8N7L0 139 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 OR4S2Q8NH73 311 aa11.05□□□□□ -0.64
CTDP1-202ENST00000299543 TET2Q6N021 2002 aaPredicted RBP11.04□□□□□ -0.64
CTDP1-202ENST00000299543 NUDT3O95989 172 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 CA2P00918 260 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 IGFBP2P18065 325 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 FAM27E3Q08E93 113 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 MLANAQ16655 118 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 MPV17L2Q567V2 206 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 Q8N7P7 452 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 OCC1Q8TAD7 63 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 NPVFQ9HCQ7 196 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 ELOVL5Q9NYP7 299 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 SLC25A15Q9Y619 301 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 FBLL1A6NHQ2 334 aaKnown RBP11.04□□□□□ -0.64
CTDP1-202ENST00000299543 IGHV3-48P01763 117 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 REG1BP48304 166 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 LOXL3P58215 753 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 SELENOVP59797 346 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 KRTCAP3Q53RY4 240 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 TRAT1Q6PIZ9 186 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 STPG3Q8N7X2 389 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 SLC24A4Q8NFF2 622 aa11.04□□□□□ -0.64
CTDP1-202ENST00000299543 CHTOPQ9Y3Y2 248 aaKnown RBP11.04□□□□□ -0.64
CTDP1-202ENST00000299543 TRBV20OR9-2A0A075B6H5 130 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 TRGV10A0A0A0MS01 117 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 A0A1W2PN81 502 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 HSBP1L1C9JCN9 74 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 TYMSP04818 313 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 RPL31P62899 125 aaKnown RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 MBNL2Q5VZF2 373 aaKnown RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 STUMQ69YW2 141 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 NIT1Q86X76 327 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 OR8I2Q8N0Y5 310 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 ZADH2Q8N4Q0 377 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 SVIPQ8NHG7 77 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 SFRP2Q96HF1 295 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 YTHDF2Q9Y5A9 579 aaKnown RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 MMP23AO75900 390 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 VDAC2P45880 294 aaPredicted RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 TNFAIP6P98066 277 aaPredicted RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 RAB31Q13636 194 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 ZNF474Q6S9Z5 364 aaPredicted RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 MRPL52Q86TS9 123 aaKnown RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 C1orf162Q8NEQ5 155 aaPredicted RBP11.03□□□□□ -0.64
CTDP1-202ENST00000299543 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 AHRRA9YTQ3 701 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 TMPRSS2O15393 492 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 OR7C2O60412 319 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 CXorf1O96002 111 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 CGAP01215 116 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 IGLV1-44P01699 117 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 APOA2P02652 100 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 OR10J4P0C629 311 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 PPOXP50336 477 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 GUSBP1Q15486 140 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 VWC2Q2TAL6 325 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 ZNF841Q6ZN19 808 aa11.03□□□□□ -0.64
CTDP1-202ENST00000299543 SEM1Q6ZVN7 128 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms