RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 CSRP1P21291 193 aaKnown RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 TFF3Q07654 80 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 C2orf68Q2NKX9 166 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 CD200R1LQ6Q8B3 271 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 POLEQ07864 2286 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 FAM90A9PA6NNJ1 464 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 GCHFRP30047 84 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 PHLDA1Q8WV24 401 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 ITLN2Q8WWU7 325 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 ZNF501Q96CX3 271 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SLC25A38Q96DW6 304 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SCARF2Q96GP6 870 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 NPCDR1Q9BY65 106 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 CNTFRP26992 372 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 C9orf153Q5TBE3 101 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SAXO1Q8IYX7 474 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 OR11H4Q8NGC9 324 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 HIST1H2BLQ99880 126 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 FNDC4Q9H6D8 234 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 TCF19Q9Y242 345 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV3-49A0A0A0MS15 119 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 PEX7O00628 323 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 ICAM4Q14773 271 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SFTA2Q6UW10 78 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 GGTLC3B5MD39 225 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM186Q96B77 213 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 LHFPL6Q9Y693 200 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 IGKV3D-20A0A0C4DH25 116 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 C1QAP02745 245 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 FUT5Q11128 374 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 Q96M66 194 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 TOMM7Q9P0U1 55 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV2A0A0B4J234 112 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 J3QW42 95 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 NDUFA2O43678 99 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 OR5P3Q8WZ94 311 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 UTF1Q5T230 341 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SLC25A48Q6ZT89 311 aaKnown RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 CENPVQ7Z7K6 275 aaPredicted RBP4.72□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV3OR16-13A0A075B7E8 117 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 IGHV3-74A0A0B4J1X5 117 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 TRAV8-2A0A0B4J237 113 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 FCN3O75636 299 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 CDKN1BP46527 198 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SLC25A47Q6Q0C1 308 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 SLC22A18ASQ8N1D0 253 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 TEX45Q8NA69 505 aa4.72□□□□□ -1.65
CPSF2-201ENST00000298875 A0A1B0GUT8 65 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 SMAD7O15105 426 aaKnown RBP4.71□□□□□ -1.65
CPSF2-201ENST00000298875 RAMP1O60894 148 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 IL6RP08887 468 aaPredicted RBP4.71□□□□□ -1.65
CPSF2-201ENST00000298875 PTGDSP41222 190 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 HSPE1P61604 102 aaKnown RBP4.71□□□□□ -1.65
CPSF2-201ENST00000298875 VGLL1Q99990 258 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 TMEM74BQ9NUR3 256 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 S4R3C0 116 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 COL11A2P13942 1736 aaPredicted RBP4.71□□□□□ -1.65
CPSF2-201ENST00000298875 C1orf100Q5SVJ3 147 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 MEGF9Q9H1U4 602 aa4.71□□□□□ -1.65
CPSF2-201ENST00000298875 TRBV24-1A0A075B6N3 115 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 TRAV21A0A0B4J279 112 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 NPIPB13A6NJU9 1138 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 NPIPB4C9JG80 1138 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 NPIPB11E5RHQ5 1161 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 H3BUT2 72 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 ACYP1P07311 99 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 IFITM2Q01629 132 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 SMIM20Q8N5G0 67 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 FOXD3Q9UJU5 478 aaPredicted RBP4.71□□□□□ -1.66
CPSF2-201ENST00000298875 HS3ST3B1Q9Y662 390 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 RALGAPA2Q2PPJ7 1873 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 FGF11Q92914 225 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 SPXQ9BT56 116 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 CHAC1Q9BUX1 264 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 FGF16O43320 207 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 DPM2O94777 84 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 TDGF1P13385 188 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 NRN1Q9NPD7 142 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 YLPM1P49750 1951 aaKnown RBP4.71□□□□□ -1.66
CPSF2-201ENST00000298875 TRBV5-7A0A0A0MS05 114 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 IGLV1-36A0A0B4J1U3 117 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 IGHV3-35A0A0C4DH35 117 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 NGFRP08138 427 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 SPINK8P0C7L1 97 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 PAX2Q02962 417 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 LINC01545Q5VT33 79 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 FOXA2Q9Y261 457 aaPredicted RBP4.71□□□□□ -1.66
CPSF2-201ENST00000298875 TSPAN7P41732 249 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 NPIPB3Q92617 1050 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 SDF2L1Q9HCN8 221 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 FOXS1O43638 330 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 ZNF585BQ52M93 769 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 GATAD1Q8WUU5 269 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 A0A1W2PRX2 142 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 IZUMO1RA6ND01 250 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 PRSS53Q2L4Q9 553 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 KLF17Q5JT82 389 aaPredicted RBP4.71□□□□□ -1.66
CPSF2-201ENST00000298875 RPP21Q9H633 154 aaKnown RBP4.71□□□□□ -1.66
CPSF2-201ENST00000298875 OSTCQ9NRP0 149 aa4.71□□□□□ -1.66
CPSF2-201ENST00000298875 SEMA5BQ9P283 1151 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms