RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 OR9G4Q8NGQ1 327 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 SCARB1Q8WTV0 552 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 RBPMSQ93062 196 aaKnown RBP6.95□□□□□ -1.3
HMGN1-201ENST00000288344 SLC25A21Q9BQT8 299 aaPredicted RBP6.95□□□□□ -1.3
HMGN1-201ENST00000288344 STAB2Q8WWQ8 2551 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 NBEAL2Q6ZNJ1 2754 aa6.95□□□□□ -1.3
HMGN1-201ENST00000288344 TRBV7-1A0A0A6YYK4 115 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 PPP5D1E7EU14 171 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 OR2C1O95371 312 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 CTSGP08311 255 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 IL7P13232 177 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 EDN2P20800 178 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 SYNJ2BPP57105 145 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 RAB25P57735 213 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 CNPY1Q3B7I2 92 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 TMEM128Q5BJH2 165 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 FAM209BQ5JX69 171 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 SPANXN2Q5MJ10 180 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 FAM219AQ8IW50 185 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 ZNF436Q9C0F3 470 aaPredicted RBP6.94□□□□□ -1.3
HMGN1-201ENST00000288344 S4R3C0 116 aa6.94□□□□□ -1.3
HMGN1-201ENST00000288344 A0A0B4J2A0 478 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 TMEM213A2RRL7 107 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 ZNF785A8K8V0 405 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 GGCTO75223 188 aaKnown RBP6.93□□□□□ -1.3
HMGN1-201ENST00000288344 NDUFB6O95139 128 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 DHFRP00374 187 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 IGHV3-23P01764 117 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 RNASE2P10153 161 aaKnown RBP6.93□□□□□ -1.3
HMGN1-201ENST00000288344 SPNP16150 400 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 AP3S2P59780 193 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 ANKRD55Q3KP44 614 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 CLEC19AQ6UXS0 136 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 LYZL2Q7Z4W2 148 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 SGPP2Q8IWX5 399 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 SLC35G3Q8N808 338 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 OR4A16Q8NH70 328 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 CXorf58Q96LI9 332 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 SCGB3A2Q96PL1 93 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 CHRDL1Q9BU40 450 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.93□□□□□ -1.3
HMGN1-201ENST00000288344 SHPKQ9UHJ6 478 aa6.93□□□□□ -1.3
HMGN1-201ENST00000288344 C14orf166Q9Y224 244 aaKnown RBP6.93□□□□□ -1.3
HMGN1-201ENST00000288344 IZUMO1RA6ND01 250 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 A8MWP6 167 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 CCR6P51684 374 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 SPCS3P61009 180 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 MLANAQ16655 118 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 DEFB114Q30KQ6 69 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 TMEM268Q5VZI3 342 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 C11orf87Q6NUJ2 197 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 SLC25A24Q6NUK1 477 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 OR1L6Q8NGR2 347 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 MRAPQ8TCY5 172 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 EEF1AKMT3Q96AZ1 226 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 FNDC4Q9H6D8 234 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-201ENST00000288344 ZMAT4Q9H898 229 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 ZC4H2Q9NQZ6 224 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 MCUBQ9NWR8 336 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 MRPL36Q9P0J6 103 aaKnown RBP6.92□□□□□ -1.3
HMGN1-201ENST00000288344 FLVCR2Q9UPI3 526 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 ZNF256Q9Y2P7 627 aaPredicted RBP6.92□□□□□ -1.3
HMGN1-201ENST00000288344 KCNIP3Q9Y2W7 256 aa6.92□□□□□ -1.3
HMGN1-201ENST00000288344 NAP1L6A6NFF2 107 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 C2orf70A6NJV1 201 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 A8MZ25 164 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 ATG12O94817 140 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 SFT2D2O95562 160 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 SLC25A6P12236 298 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 DEFA4P12838 97 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 AKR1C4P17516 323 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 CBLN1P23435 193 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 FAUP35544 74 aaKnown RBP6.91□□□□□ -1.3
HMGN1-201ENST00000288344 IFITM3Q01628 133 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 PPP1R1AQ13522 171 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 RPEL1Q2QD12 228 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 TRIM16LQ309B1 348 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 SPINK9Q5DT21 86 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 HAPLN4Q86UW8 402 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 PRR25Q96S07 402 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 TXN2Q99757 166 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 C7orf50Q9BRJ6 194 aaKnown RBP6.91□□□□□ -1.3
HMGN1-201ENST00000288344 THYN1Q9P016 225 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 HSPB7Q9UBY9 170 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 ZMAT5Q9UDW3 170 aaKnown RBP6.91□□□□□ -1.3
HMGN1-201ENST00000288344 CACNG5Q9UF02 275 aa6.91□□□□□ -1.3
HMGN1-201ENST00000288344 KMT2CQ8NEZ4 4911 aaKnown RBP6.91□□□□□ -1.3
HMGN1-201ENST00000288344 TGOLN2O43493 480 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 SAP30O75446 220 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 TMEM50AO95807 157 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 FOLR2P14207 255 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 GP9P14770 177 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 ARL3P36405 182 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 AKR1C2P52895 323 aa6.9□□□□□ -1.3
HMGN1-201ENST00000288344 ELLP55199 621 aaPredicted RBP6.9□□□□□ -1.3
HMGN1-201ENST00000288344 UBE2MP61081 183 aaKnown RBP6.9□□□□□ -1.3
HMGN1-201ENST00000288344 ERHP84090 104 aaKnown RBP6.9□□□□□ -1.3
HMGN1-201ENST00000288344 RBMS2Q15434 407 aaKnown RBP6.9□□□□□ -1.3
HMGN1-201ENST00000288344 C2orf83Q53S99 150 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms