RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CA1P00915 261 aaPredicted RBP10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 RTL8BQ17RB0 113 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 CYB5R2Q6BCY4 276 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 SEM1Q6ZVN7 128 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 FAM216BQ8N7L0 139 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 FAM169BQ8N8A8 192 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 RND1Q92730 232 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 SNRNP40Q96DI7 357 aaKnown RBP10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 KCNS1Q96KK3 526 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 ARFGEF3Q5TH69 2177 aa10.79□□□□□ -0.68
SLC28A1-201ENST00000286749 TRAV5A0A0B4J249 113 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 A0A1W2PS18 150 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 ZNF253O75346 499 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 AMY1AP04745 511 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 RNASE2P10153 161 aaKnown RBP10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 SRIP30626 198 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 PPOXP50336 477 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 C2orf83Q53S99 150 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 OR10J3Q5JRS4 329 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 MORN5Q5VZ52 161 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 STUMQ69YW2 141 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 FAM222BQ8WU58 562 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 GAFA1Q96PS6 74 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 SLC25A33Q9BSK2 321 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 TMEM208Q9BTX3 173 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 DYSFO75923 2080 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 SMIM27A0A1W2PRY6 76 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 BMPR1BO00238 502 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 SAA1P0DJI8 122 aaPredicted RBP10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 C8orf88P0DMB2 117 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 GLRXP35754 106 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 TMEM68Q96MH6 324 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 RNF7Q9UBF6 113 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 CDC42EP3Q9UKI2 254 aa10.78□□□□□ -0.68
SLC28A1-201ENST00000286749 A0A1W2PRE2 83 aa10.77□□□□□ -0.68
SLC28A1-201ENST00000286749 WT1P19544 449 aaPredicted RBP10.77□□□□□ -0.68
SLC28A1-201ENST00000286749 LINC00479Q96M42 142 aa10.77□□□□□ -0.68
SLC28A1-201ENST00000286749 RNF2Q99496 336 aa10.77□□□□□ -0.68
SLC28A1-201ENST00000286749 HLA-DQA1P01909 254 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 UBE2L3P68036 154 aaKnown RBP10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 CD69Q07108 199 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 COX19Q49B96 90 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 IGFL2Q6UWQ7 119 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 SLC25A48Q6ZT89 311 aaKnown RBP10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 PNKDQ8N490 385 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 OR4B1Q8NGF8 309 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 OR2T6Q8NHC8 308 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 C19orf24Q9BVV8 132 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 SSBP3Q9BWW4 388 aaPredicted RBP10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 SLC25A2Q9BXI2 301 aa10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 RPUSD1Q9UJJ7 312 aaKnown RBP10.77□□□□□ -0.69
SLC28A1-201ENST00000286749 DLEU1O43261 78 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 TNFAIP6P98066 277 aaPredicted RBP10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF474Q6S9Z5 364 aaPredicted RBP10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 OR1L8Q8NGR8 309 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 FAM168AQ92567 244 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 LOXL4Q96JB6 756 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 FAM167A-AS1Q96KT0 104 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 LPAR2Q9HBW0 351 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 NAV3Q8IVL0 2385 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 IGLV3-9A0A075B6K5 115 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF324O75467 553 aaPredicted RBP10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 GATA4P43694 442 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 OR5B3Q8NH48 314 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 DCAF16Q9NXF7 216 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 BET1LQ9NYM9 111 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 ZFHX4Q86UP3 3567 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 ASPMQ8IZT6 3477 aa10.76□□□□□ -0.69
SLC28A1-201ENST00000286749 IZUMO1RA6ND01 250 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 IGHV1-46P01743 117 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 APCSP02743 223 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 USF1P22415 310 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 SSBP2P81877 361 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 SPATA45Q537H7 98 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 TIMM23BQ5SRD1 257 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 FAM19A2Q8N3H0 131 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 PSMB11A5LHX3 300 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 MBD3L4A6NDZ8 208 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 MBD3L3A6NE82 208 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 MBD3L5A6NJ08 208 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 NPSP0C0P6 89 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 PYYP10082 97 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 CHRNB4P30926 498 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 NIT1Q86X76 327 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 RPRMLQ8N4K4 120 aa10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 MBD3L2Q8NHZ7 208 aaPredicted RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 MRPL32Q9BYC8 188 aaKnown RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 MRPL20Q9BYC9 149 aaKnown RBP10.75□□□□□ -0.69
SLC28A1-201ENST00000286749 CTRLP40313 264 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 ATP5IP56385 69 aaPredicted RBP10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 SLAQ13239 276 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 ZNF788Q6ZQV5 615 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 TSKUQ8WUA8 353 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 HARBI1Q96MB7 349 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 COMMD5Q9GZQ3 224 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 LINC00574Q9H8X3 128 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 DNAJC4Q9NNZ3 241 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 GOLT1BQ9Y3E0 138 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 E7EUB6 86 aa10.74□□□□□ -0.69
SLC28A1-201ENST00000286749 DLL1O00548 723 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms